Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1563 ATGGCCAAGAGAGGGGTCTCAGCCACCGACGCAACCGTGGTTGCAAATGCAGGGGGGTTGGATTTGAAGCGAAATTTGCGTGGCCTTGTAAATATTATCTTGGAAGATGATAATTGCCCGGTGGCCACCATTGACGAGGCTATTACGACTCTTTCTGCTCTCAAGGATTTGAAATATAGCAGGCCCCTCCCTCAGAAATTCGATGAATTGTCTACTCCTGCGGAATTCCGATGCCCCATTTCAAGAGAGCTGATGAGGGATCCTGTTATCTTGGCCACTGGACAGGAGTGGAAAATGGAAGGAATAGAAGAAGAGGGTAATCTGGATATAGTATTGTTACTCATTATTGTGTTCCTTAATTCATGTTTCTATGTTGCAGACCTATGA 387 0.4548 MAKRGVSATDATVVANAGGLDLKRNLRGLVNIILEDDNCPVATIDEAITTLSALKDLKYSRPLPQKFDELSTPAEFRCPISRELMRDPVILATGQEWKMEGIEEEGNLDIVLLLIIVFLNSCFYVADL 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1563 128 ProSiteProfiles U-box domain profile. 71 95 IPR003613 GO:0004842|GO:0016567
Bisa03g1563 128 Pfam U-box domain 73 98 IPR003613 GO:0004842|GO:0016567
Bisa03g1563 128 SUPERFAMILY RING/U-box 68 96 - -
Bisa03g1563 128 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 65 105 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1563 Bisa-ChrBisa03 21208565 21209679 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1563 60 103 U-box Gene Family AT5G01830 48.980 2.19e-09 52.4