Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1549 ATGGAACCCAACGAAAACCAGCTCAGCTCCTACTTCCACCACCAACAGCAGCATAGCACCACCTCCACCGTCACCCCTACAACCGCCATCGCCTCCACACCCTCGCCGACCAATGGCCTCTTGCCTAGCACTGACGGGTCCCACATGGTGTACCCTCATTCCGTGCCATCTGCGGTTTCCTCTCAATTAGAACCCCCCAAGAGGAAGAGAGGGAGGCCCAGGAAGTACGGCACCCCCGAGCAAGCTCTAGCCGCAAAGAAAGCTGCTACGTCGTCGTCTCACTCCTTCTCTCATAAGGACAAGAAGGACCATGCCTTGGGTGGTGCCTCTGCTTCATCTTCTTATGCAGGCTCCTCGAAGAAATCCCAGTCGTTTGCCCTAGGCAATGCAGGACAAGGCTTCACTCCACATGTCATTACTGTTGCTGCTGGTGAGGATGTTGGCCAGAAAATTATGTTATTCGTGCAACAAAGTAGGCGTGAAATGTGCATTCTGTCTGCATCTGGTTCCATATCTAATGCCTCTCTTCGTCAACCAGCGACCTCAGGAGGCAATATTACATATGAGGGTCGATTTGAGATTATTTCACTATCTGGTTCCTATGTCCGTAATGAACTGGGAGGGCGTACTGGTGGTCTTAGCGTATGCTTATCTAGTACCGATGGCCAAATCATAGGTGGAGGAGTTGGTGGACCCCTAAAAGCTGCTGGTCCAGTTCAGGTCATTGTTGGTACATTTTTTCTGGACGCCAAGAAGGATGCTGGTGCTGGTGTAAAAGGTGATGCTTCTGGGAGCAAAATGGCATCACTGGTTGGGGAATCAGTATCAAATTTAGGTTTCCACTCTGGAGTTGAATCTTCCAGTGGGAATACAATTCGGGGAAATGATGATCATCAAGCTATCGGAGGGAGTCACTTCATGATTCAGCCGCGTGGTGTGCATGTAACACCTTCCCAGCCCACAGACTGGGGCGGCCGTCCTGATTCCAGGCATGCCGGCTATGAACTGACAGGAAGATCAGGGCATGGAGCTCACGCGCACCAATCTCCCGAGAATGGGGATTATTTAACATGA 1074 0.513 MEPNENQLSSYFHHQQQHSTTSTVTPTTAIASTPSPTNGLLPSTDGSHMVYPHSVPSAVSSQLEPPKRKRGRPRKYGTPEQALAAKKAATSSSHSFSHKDKKDHALGGASASSSYAGSSKKSQSFALGNAGQGFTPHVITVAAGEDVGQKIMLFVQQSRREMCILSASGSISNASLRQPATSGGNITYEGRFEIISLSGSYVRNELGGRTGGLSVCLSSTDGQIIGGGVGGPLKAAGPVQVIVGTFFLDAKKDAGAGVKGDASGSKMASLVGESVSNLGFHSGVESSSGNTIRGNDDHQAIGGSHFMIQPRGVHVTPSQPTDWGGRPDSRHAGYELTGRSGHGAHAHQSPENGDYLT 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1549 357 ProSiteProfiles PPC domain profile profile. 130 271 IPR005175 -
Bisa03g1549 357 Pfam Plants and Prokaryotes Conserved (PCC) domain 136 246 IPR005175 -
Bisa03g1549 357 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 17 282 IPR039605 GO:0003680
Bisa03g1549 357 MobiDBLite consensus disorder prediction 1 114 - -
Bisa03g1549 357 Gene3D - 136 260 - -
Bisa03g1549 357 MobiDBLite consensus disorder prediction 316 357 - -
Bisa03g1549 357 MobiDBLite consensus disorder prediction 1 44 - -
Bisa03g1549 357 CDD DUF296 135 246 IPR005175 -
Bisa03g1549 357 SUPERFAMILY AF0104/ALDC/Ptd012-like 132 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1549 Bisa-ChrBisa03 20907948 20915024 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1549 20 355 AT-hook Motif Nuclear Localized (AHL) Family AT3G04590 53.973 6.50e-101 302