Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1547 ATGATGATACTCACGTGCGAGCTCAATTTGTTGAATGCCTGTATGATATCTCTTGTGCAAGTACATTTACTTGATAACGTGCTAGAGCACAATGACATGATTTCAATCGTGGAGCTTTTCCTTCGAAGCCTGCGAGCTCAAATCTTGTGCAATATTATAAATCGTCCACTCTATGTGATCCTCTGTGTTTGCATATCCCTTATGCTAGAGGATTTGATGATGGATGATGAACATTTTCTAACAGACATGTACAATTTAGGACTCCTAGTGGCCATCGAGATGTCAAATCCAAAGGTGTTCTTTGACATTCTAATTGGAAGGATGAAAGCTGGGCGAATAGTGATGGAGCTATTTTCAGATGTCACCCCAAAGACAGCTGAAAACTTCCGAGCTCTCTGCACTGGTGAAAAGGGGATTGGAGCATCCGGGAAGCCTTTACACTACAAGGGATCCAAATTCCATCGAATCATTCCAGATTTCATGTGTCAAGGAGGAGATTTCACTAGAGGAAACGGAACTGGAGGAGAATCAATTTATGGCGCCAAATTTGCCGACGAGAATTTCAAGTTGAACCATACAGGGCCTGGCGTTCTCTCAATGGCAAATGCTGGACCCAATACAAATGGTTCTCAGTTCTTTATTTGTACCACGACGACACCATGGCTTGATGGAAAGCATGTTGTATTTGGAAAAGTAGTTGATGGTTACAGCGTAGTTAGGGAGATGGAAAAGGTGGGTTCAGAGAGTGGGACGACACGAGAACCAGTTGTGATTGAGGATTGTGGTCAGATAGGGGACAAATGA 804 0.4316 MMILTCELNLLNACMISLVQVHLLDNVLEHNDMISIVELFLRSLRAQILCNIINRPLYVILCVCISLMLEDLMMDDEHFLTDMYNLGLLVAIEMSNPKVFFDILIGRMKAGRIVMELFSDVTPKTAENFRALCTGEKGIGASGKPLHYKGSKFHRIIPDFMCQGGDFTRGNGTGGESIYGAKFADENFKLNHTGPGVLSMANAGPNTNGSQFFICTTTTPWLDGKHVVFGKVVDGYSVVREMEKVGSESGTTREPVVIEDCGQIGDK 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1547 267 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 224 239 IPR002130 GO:0000413|GO:0003755
Bisa03g1547 267 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 211 223 IPR002130 GO:0000413|GO:0003755
Bisa03g1547 267 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 153 165 IPR002130 GO:0000413|GO:0003755
Bisa03g1547 267 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 196 211 IPR002130 GO:0000413|GO:0003755
Bisa03g1547 267 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 117 132 IPR002130 GO:0000413|GO:0003755
Bisa03g1547 267 SUPERFAMILY Cyclophilin-like 88 264 IPR029000 -
Bisa03g1547 267 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 100 263 IPR002130 GO:0000413|GO:0003755
Bisa03g1547 267 FunFam Peptidyl-prolyl cis-trans isomerase 93 265 - -
Bisa03g1547 267 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 107 262 IPR002130 GO:0000413|GO:0003755
Bisa03g1547 267 CDD cyclophilin_ABH_like 97 262 - -
Bisa03g1547 267 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 148 165 IPR020892 GO:0003755|GO:0006457
Bisa03g1547 267 Gene3D - 90 267 IPR029000 -
Bisa03g1547 267 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 98 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1547 Bisa-ChrBisa03 20895517 20899442 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1547 111 245 U-box Gene Family AT5G67530 50.000 1.44e-30 117