Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1544 ATGGATTCCTATTCGTCCCTGGCTCTTCCCTTCAACGAGAACGACTCCCAGGACATGCTTCTTTACCAAGTTCTGGAGGAGGCCGAAGCAGCGACATCATCATCAACGTCGTCGTTTCACGGAGAGGTGATGAGCTCTGAATTTGCCGATCCACAGGTTCAATGTTCGCAGTCGCAGGTGTCGTACAGAGGAGTGAGACGGCGGCCCTGGGGGAAGTACGCGGCGGAGATAAGAGACTCCACGAGGAATGGAGTGAAAGTGTGGCTAGGTACCTTCGACACTGCGGAGGCTGCTGCTTTGGCTTACGATCAAGCAGCCCTAGCAATGCGAGGTTCTTCCGCTGTTCTCAATTTCCCTCCTCAGTTGGTTCGTCTATCCCTAATTCAAACCATGGACTCTGCTTCTGCTTTCACTCAGGGCTCCTCCCCAGTTTTGGAATTGAAGAAAAGGCACTCCATCATCAGAAAATCCCAATCCAATGATTTGGGGCCTGACTATTTGGATCGTCTAGATGGAGTACTTTTCAACACCAAGATCACAACAAACAGTATGTAA 555 0.5045 MDSYSSLALPFNENDSQDMLLYQVLEEAEAATSSSTSSFHGEVMSSEFADPQVQCSQSQVSYRGVRRRPWGKYAAEIRDSTRNGVKVWLGTFDTAEAAALAYDQAALAMRGSSAVLNFPPQLVRLSLIQTMDSASAFTQGSSPVLELKKRHSIIRKSQSNDLGPDYLDRLDGVLFNTKITTNSM 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1544 184 CDD AP2 62 121 IPR001471 GO:0003700|GO:0006355
Bisa03g1544 184 FunFam Ethylene-responsive transcription factor 2 60 121 - -
Bisa03g1544 184 PANTHER DNA-BINDING DOMAIN 22 138 IPR044808 GO:0003700|GO:0009873
Bisa03g1544 184 PRINTS Ethylene responsive element binding protein signature 85 101 IPR001471 GO:0003700|GO:0006355
Bisa03g1544 184 PRINTS Ethylene responsive element binding protein signature 62 73 IPR001471 GO:0003700|GO:0006355
Bisa03g1544 184 Gene3D AP2/ERF domain 61 120 IPR036955 GO:0003700|GO:0006355
Bisa03g1544 184 Pfam AP2 domain 62 111 IPR001471 GO:0003700|GO:0006355
Bisa03g1544 184 SUPERFAMILY DNA-binding domain 62 120 IPR016177 GO:0003677
Bisa03g1544 184 ProSiteProfiles AP2/ERF domain profile. 61 119 IPR001471 GO:0003700|GO:0006355
Bisa03g1544 184 SMART rav1_2 61 125 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1544 Bisa-ChrBisa03 20870618 20871172 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1544 9 156 AP2-EREBP Transcription Factor Family AT3G23240 52.703 1.36e-48 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa03g1544 AP2 4.6e-15 CL0081