Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1528 ATGGACGGCTCTGTCGTCCATTCTGCACAATTAAACGGGGCCAAGATGAGGATTATGATAAAGGGTGGTGTTTGGAAAAACACCGAAGATGAAATTCTAAAAGCGGCTGTTATGAAATATGGCAAAAATCAGTGGGCTCGAATCTCTTCGCTCTTGGTTCGCAAATCCGCCAAGCAATGTAAGGCTCGTTGGTACGAGTGGCTCGATCCTTCCATTAAGAAGACTGAGTGGACAAGAGAAGAGGATGAGAAACTACTTCATCTTGCTAAGCTTATGCCCACACAGTGGAGAACAATTGCTCCAATTGTAGGTCGTACCCCTTCCCAGTGCCTTGAGCGCTATGAGAAGCTCCTTGATGCAGCCTGTGTAAAGGATGAGAACTATGAACCTGGTGATGACCCTCGGAAATTGCGTCCTGGTGAGATTGATCCAAACCCTGAGTCGAAACCTGCACGCCCAGATCCTGTTGATATGGATGAGGATGAGAAGGAAATGCTGTCTGAAGCACGAGCTCGATTAGCCAATACTAAGGGCAAGAAGGCAAAAAGGAAGGCTAGGGAGAAACAGCTTGAGGAAGCAAGGAGGCTTGCTTCTTTACAAAAAAAGAGAGAGTTGAAGGCTGCTGGAATTGATGTCAGACAGCGGAGGAGGAAAAGGAAAGGAATAGACTATAATGCAGAAATTCCATTTGAGAAAAGGCCTCCTCCAGGATTTTTTGATGTTACAGATGAAGATAGACCAGTGGAACAGCCCAAGTTTCCCACTACAATTGGAGAACTTGAGGGAAAAAGAAGGATCGATGTAGAAGCACAGTTAAGAAAACAAGACACTGCAAAGAATAAAATTGCACAAAGGCAAGATGCCCCATCTGCTATAATGCATGCCAACAAGCTAAATGACCCAGAGACGGTTAGAAAGAGGTCAAGCCTGATGCTTCCGCCACCCCAGATTTCTGACCATGAATTGGAAGAAATAGCCAAGATGGGTTATGCTAGTGACCTTGCAGGGAGTGAAGAACTTACAGAAGGTAGTGGTGCAACACGTGCTCTTCTGGCTAATTATGCACAGACACCTAACCAGGGAATGACTCCTTTGCGTACACCTCAGAGAACACCAGCTGGTAGAGATGCTGTCTTGATGGAAGCTGAAAATTTGGCCAGGTTGAGAGAGTCTCAGACACCATTGTTAGGAGGAGATAACCCAGAGTTGCATCCTTCAGATTTTTCTGGGGTCACTCCTAAGAAAAAGGAGATTCAGACTCCCAATCCAATGCTTACCCCCTCTGCAACCCCTGGAGGTGCTGGTCTCACTCCCCGAAGTGGTATGACACCAGCAAGGGATGGCTTTTCTTTTGGCTTGACTCCAAAAGGAACTCCTTTGAGGGATGAGCTTCGTATTAACGAGGGCATGGATATGCAAGACAGTGCAAAACTTGAGCTACAGAAACAAGCTGATCTGAGGAGAAGTTTGCGCTCTGGTTTAAGCGGTCTTCCACAACCCAAAAATGAGTACCAGATAGTTATGCAACCAGTTACTGAAGATGCTGAAGAACCTGAGGAGAAGATTGAAGAGGATATGTCTGATAGGCTAGCCAGAGAAAAGGCTGAAGAAGAAGCACGGCAGCAGGCATTATTAAGAAAACGATCAAAAGTCCTCCAAAGAGAACTTCCTAGGCCTCCTGCTGCATCTTTAGATTTAATAAGAAATTCCTTGCTGAGAGCTGACGGTGACAAGAGTTCCTTTGTGCCACCTACTTCTATTGAGCTAGCTGATGAGATGATAAGAAAGGAGCTTTTAACCTTATTGGAACATGACAATGTTAAGTATCCACTTGATGAGAAGGCTAATAAGGAGAAAAAGAAAGGAATCAAGCGCACGACAAATGTTGCTGTCCCTGTTATAGAAGATTTTGAGGAAGATGAAATGAAAGATGCTGATCAGTTGATAAAAGAAGAGGCCCAGTATCTTCGTGTTGCAATGGGGCATGAATGTGAACTCCTTGATGAATTTGTTGAAGCACACAGAACTTGCCTTAATGATCTTATGTACTTTCCCACTCGTAATGCCTATGGTCTCTCTAGCGTTGCTGGAAATATGGAGAAGCTTGCAGCTTTGCAGGATGAATTTGAGAATGTGAGAAAAAAGCTGGATGATGGCAAAGAGAAGGTAGTACGCCTTGAGAAGAAGGTGATGGTGTTCACGCAAGGCTATGAGATGCGGGCAAAAAAAAGTCTTTGGCCACAAATTGAAGCCACCTTCAAGCAGATGGACACCGCAGCAACAGAGTTTGAGTGCTTCCAAGCTTTGCAAAAGCAGGAGCAACTAGCAGCGTCTCATAGGGTAAACAATCTGTGGGCTGAAGTACAGAAGCAAAAGGAACTTGAGAAAACTCTGCAAATGAAATATGGGGATCTTCTGGCTGAGGTAGAAAGGATACAGAATGTCATGAATCAATACAGGGTACAAACACAAAAGCAAAAAGAAATTGCTGCAAATAATCACACTGTTGAGTTAGCTGAGACTGCAGCTGACGAAACTACTACTTATCATACAGAGAATTGTCAACCTTTGTCCCCCTCAAAAGAGCATGGAAGTGCTATGTCAGTTGATTCTTCTAATGTTGATAGTGATGAGCAGAAGGTTGACATTGTGCAAGACCAGGGCACTTCAAGCCCCAAAACCGATATGGATGTGGATGCAGGAAAAGAGCAAATGACTCTCAACGCTGATGTTAAATTATCAGATACTGCACCTGCCGCAGAGGGGGACAGTGCAACAGTGGTTCAAGGTAACAGCAGCAATAGTCTTATGGCTGACAAAGAGACCACTCTCAGCGATTGTCTTATGGCCGACAAAGAGACCACTCGAGATACGGCTGTTGCAAAGGAGAATGGAGCTATTGAGTCAAATAGGGAGGTTCAAGATGTTGAAAATCCAGAAAATGTTGTGGAAACCACTGCTTTTAATGAAGGAGATAAGATGCAAGAGGAGTCAAGTTAG 3000 0.445 MDGSVVHSAQLNGAKMRIMIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKTEWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLERYEKLLDAACVKDENYEPGDDPRKLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTKGKKAKRKAREKQLEEARRLASLQKKRELKAAGIDVRQRRRKRKGIDYNAEIPFEKRPPPGFFDVTDEDRPVEQPKFPTTIGELEGKRRIDVEAQLRKQDTAKNKIAQRQDAPSAIMHANKLNDPETVRKRSSLMLPPPQISDHELEEIAKMGYASDLAGSEELTEGSGATRALLANYAQTPNQGMTPLRTPQRTPAGRDAVLMEAENLARLRESQTPLLGGDNPELHPSDFSGVTPKKKEIQTPNPMLTPSATPGGAGLTPRSGMTPARDGFSFGLTPKGTPLRDELRINEGMDMQDSAKLELQKQADLRRSLRSGLSGLPQPKNEYQIVMQPVTEDAEEPEEKIEEDMSDRLAREKAEEEARQQALLRKRSKVLQRELPRPPAASLDLIRNSLLRADGDKSSFVPPTSIELADEMIRKELLTLLEHDNVKYPLDEKANKEKKKGIKRTTNVAVPVIEDFEEDEMKDADQLIKEEAQYLRVAMGHECELLDEFVEAHRTCLNDLMYFPTRNAYGLSSVAGNMEKLAALQDEFENVRKKLDDGKEKVVRLEKKVMVFTQGYEMRAKKSLWPQIEATFKQMDTAATEFECFQALQKQEQLAASHRVNNLWAEVQKQKELEKTLQMKYGDLLAEVERIQNVMNQYRVQTQKQKEIAANNHTVELAETAADETTTYHTENCQPLSPSKEHGSAMSVDSSNVDSDEQKVDIVQDQGTSSPKTDMDVDAGKEQMTLNADVKLSDTAPAAEGDSATVVQGNSSNSLMADKETTLSDCLMADKETTRDTAVAKENGAIESNREVQDVENPENVVETTAFNEGDKMQEESS 999
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1528 999 CDD SANT 25 68 IPR001005 -
Bisa03g1528 999 Coils Coil 695 729 - -
Bisa03g1528 999 FunFam CDC5 cell division cycle 5-like 75 135 - -
Bisa03g1528 999 Gene3D - 20 74 - -
Bisa03g1528 999 Pfam Myb-like DNA-binding domain 25 85 - -
Bisa03g1528 999 MobiDBLite consensus disorder prediction 276 299 - -
Bisa03g1528 999 MobiDBLite consensus disorder prediction 970 999 - -
Bisa03g1528 999 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 17 72 IPR017930 -
Bisa03g1528 999 MobiDBLite consensus disorder prediction 392 461 - -
Bisa03g1528 999 CDD SANT_CDC5_II 70 121 IPR047240 -
Bisa03g1528 999 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 73 122 IPR017930 -
Bisa03g1528 999 FunFam CDC5 cell division cycle 5-like 20 74 - -
Bisa03g1528 999 Pfam pre-mRNA splicing factor component 420 664 IPR021786 -
Bisa03g1528 999 Coils Coil 182 202 - -
Bisa03g1528 999 PANTHER CELL DIVISION CYCLE 5-LIKE PROTEIN 16 816 IPR047242 GO:0000398|GO:0000974
Bisa03g1528 999 MobiDBLite consensus disorder prediction 128 165 - -
Bisa03g1528 999 Gene3D - 75 129 - -
Bisa03g1528 999 ProSiteProfiles Myb-like domain profile. 17 68 IPR001005 -
Bisa03g1528 999 SUPERFAMILY Homeodomain-like 48 121 IPR009057 -
Bisa03g1528 999 ProSiteProfiles Myb-like domain profile. 69 118 IPR001005 -
Bisa03g1528 999 MobiDBLite consensus disorder prediction 172 191 - -
Bisa03g1528 999 MobiDBLite consensus disorder prediction 413 427 - -
Bisa03g1528 999 MobiDBLite consensus disorder prediction 846 874 - -
Bisa03g1528 999 MobiDBLite consensus disorder prediction 846 878 - -
Bisa03g1528 999 SMART sant 73 120 IPR001005 -
Bisa03g1528 999 SMART sant 21 70 IPR001005 -
Bisa03g1528 999 Coils Coil 527 547 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1528 Bisa-ChrBisa03 20633638 20639750 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1528 16 845 MYB-Related Transcription Factor Family AT1G09770 76.287 0.0 1248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa03g1528 Myb_Cef 1.3e-59 No_clan