Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1520 ATGATTAAGCGCAACGCCGAAATTTGTCACGAAGAAAGCAAGCTTTTCAAACCCAAAGGCTGTTTGTTGTTTTTCCCTCTCCATTATAGGTTAGAGACAAAGCTGAGTCACTTGGGAGCCTTCAGGGTAATGCCTTCATCTTTTCCTGTTCTTCCCACTCATATGGAAGACAAGTGTATGAAACCTCCAGATTCTTTTCAGCTATCTGCTGTCCGGGACCTGACTGCAAATCCTGCCTCAGTGCAGGCTGCTTCATCAGATTTCAACATCAGAAGTGGTGGAAACATGTTTTCGCTGCATGCTAAGCAGTATCAAAATTCTCCATTTATTTCTCAGAAACTAAGACGAGATGAAATGACACCCAAGCTAGGAACTTCCCTTAATCAGAGTGGTGAAGATTTGTCTTTCCCACCTATTCATTCTTCTCATTCAAAAAATCATTCCTCAACATTCATTTCTAACCCTCAGGAAGGTGATGATATTTCCTGGGGATCAGATCCCTTTCAGGATATTCTTAATCTTCCTCAAAATGATTCTGTCCAGAATGATCAGGTGGAAAATAGCAGTTGTTATATATCTGATGACAATACCAAAAAAACTGCTTTTGGAGCGTGGGTTGAGGAGTTAATGTCAGTTTACGATTCTCCGAATCCAAATTGGAGTCAGCTTCTCGGTGATGATAATGTAGAAGATTCAAAATCAAAGGGCACCCAGGCTACCAAGCAGCAACATGCACCATCTGGAAAATTGAATGCCCTTCCTTCTCCAGTGTTGAATGCACAGCAAACTAAGCCAAGAATGCGTTGGACTCCAGAACTTCATGAAGCTTTTGTGGAAGCCGTGAATAAGCTTGGTGGTAACGAGAGGGCTACTCCAAAGGGTGTCTTGAACCTAATGAAAGTTGAGGGCCTCACTATCTATCATGTGAAAAGCCACCTACAGAAGTACAGAACAGCCAGATACAAACCTGAGTCACCAGGAGGAACTTCTGAGAAAAGGTCGATGTCAAGCAAAGAAATGAAATCTTTAGACTCAAGAGCGGGTAAGGAGATTACTGAAGCATTGCGGTTGCAGATGGAACTCCAGAAGCGGCTTCATGAACAACTTGAGATTCAAAGAAAGTTGCAGCTTCAGATTGAAAAGCAAGGGAAGTGTCTTCAAATGATGTTTGAGAAACAAAGAGAGATGGAGGACAGCAAACTCAGCACATCACCCTCCCCATCAAATGAGGTTCATGACAAACCTGAAATCAGCAGTAGCATTGCAACAACCATGGGCGAAGAATGTTCTGAGGATGCAAGCACAAAGCAAAAGGCAGATGAAACTGGAGTTATTGATGAAGAAATGGAGATGGGGGGTGATCAGCTTTGTACACCACCCACCAAACGGGTTAAGACCGGATGA 1404 0.4302 MIKRNAEICHEESKLFKPKGCLLFFPLHYRLETKLSHLGAFRVMPSSFPVLPTHMEDKCMKPPDSFQLSAVRDLTANPASVQAASSDFNIRSGGNMFSLHAKQYQNSPFISQKLRRDEMTPKLGTSLNQSGEDLSFPPIHSSHSKNHSSTFISNPQEGDDISWGSDPFQDILNLPQNDSVQNDQVENSSCYISDDNTKKTAFGAWVEELMSVYDSPNPNWSQLLGDDNVEDSKSKGTQATKQQHAPSGKLNALPSPVLNAQQTKPRMRWTPELHEAFVEAVNKLGGNERATPKGVLNLMKVEGLTIYHVKSHLQKYRTARYKPESPGGTSEKRSMSSKEMKSLDSRAGKEITEALRLQMELQKRLHEQLEIQRKLQLQIEKQGKCLQMMFEKQREMEDSKLSTSPSPSNEVHDKPEISSSIATTMGEECSEDASTKQKADETGVIDEEMEMGGDQLCTPPTKRVKTG 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1520 467 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 233 434 IPR044848 GO:0003700
Bisa03g1520 467 MobiDBLite consensus disorder prediction 122 168 - -
Bisa03g1520 467 MobiDBLite consensus disorder prediction 393 467 - -
Bisa03g1520 467 Gene3D - 263 322 - -
Bisa03g1520 467 MobiDBLite consensus disorder prediction 318 346 - -
Bisa03g1520 467 MobiDBLite consensus disorder prediction 431 445 - -
Bisa03g1520 467 Pfam MYB-CC type transfactor, LHEQLE motif 350 395 IPR025756 -
Bisa03g1520 467 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 261 321 IPR017930 -
Bisa03g1520 467 MobiDBLite consensus disorder prediction 235 255 - -
Bisa03g1520 467 MobiDBLite consensus disorder prediction 216 255 - -
Bisa03g1520 467 NCBIfam myb-like DNA-binding domain, SHAQKYF class 264 318 IPR006447 GO:0003677
Bisa03g1520 467 MobiDBLite consensus disorder prediction 122 160 - -
Bisa03g1520 467 FunFam Myb family transcription factor 263 321 - -
Bisa03g1520 467 SUPERFAMILY Homeodomain-like 262 318 IPR009057 -
Bisa03g1520 467 Coils Coil 352 372 - -
Bisa03g1520 467 Pfam Myb-like DNA-binding domain 266 317 IPR001005 -
Bisa03g1520 467 MobiDBLite consensus disorder prediction 400 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1520 Bisa-ChrBisa03 20550650 20555036 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1520 92 408 G2-like Transcription Factor Family AT3G04450 44.152 5.66e-72 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bisa03g1520 Myb_DNA-binding 5.2e-09 CL0123