Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1515 ATGAAGACCCTTTTGCTGTTCCTGTGCTGTTACATTGGTGTCTTTGTTGTTTTTAATGTGGGAGCTCGAGGTGATGAATTGTCGACTCTGCTTTCTATCAGATCAAGCCTCGTTGATCCAATGAAGCACCTGAAGGATTGGCAAGTAGGAAACAGTGGTTCGTCGTTTGCTCATTGTAACTGGACTGGAGTTTGGTGTAACAGTGAAGGGTTCGTGGAAAGACTCGAACTTTCCAACATGAACCTCAGTGGTCGTGTCTCAGAACATGTTCAAGGACTTTCGAGCCTGTCTTTTTTTAACATAAGTTGTAACAATTTTGCTTCTTCGTTGCCGAAGTCACTCTCCAATCTCACTTCCTTGAAGAGCTTTGATGTCAGCCAGAACTACTTCACTGGAAGATTTCCTAGTGGTCTTGGAAGAGCCTCAGGATTGAGATCAGTCAACGCGTCGAGTAACAACTTTCTGGGTTTTCTTCCCGAGGATCTTGGAAATGCAACAATGCTCGAAAGCCTCGATTTTCGAGGAAGCTACTTCGAGGGTTCAATTCCTAAGAGCTTCAGGAATCTGCAGAAACTGACGTTTCTTGGGCTTTCAGGGAATAACTTTACAGGGAAGATTCCTAAAGAACTTGGAGGACTCAGTTCTCTAGAGACATTGATTCTTGGGTACAACGAGTTTGAAGGCGAGGTTCCTTCAGAGTTTGGCAACCTCACGAATCTCAAGTACATTGACTTGGCTGTGGGTAGTCTCAGTGGACGGATTCCACCAGAATTGGGCAAGTTGAAAAAGCTTACCACAATTTTCTTGTACAAGAACAAGTTTGGAGGCAAGATTCCCCGTGAGATTGGCAACATTACGTCACTGGAGCTTTTGGACTTGTCTGATAATCAGATTTCAGGGGAGATTCCAGAGGAACTTGCAGAATTGAAGAACTTGACGCTATTGAATGTGATGACCAATAAACTCACTGGTCTTGTACCAGAGAAGCTTGGTGAGTTGAAGAATCTGCAGGTTCTTGAGTTATGGAAAAACTCTTTACATGGTCCTTTGCCTGTGAATCTTGGACAGAACTCTCCATTGCAGTGGCTAGATGTGTCTTCCAACTCATTATCAGGTGAGATTCCTCCAGGATTGTGTGCTTCAGGAAATCTCACTAAACTCATACTTTTCAATAATTCCTTCCTCGGTCCCATCCCAAGTGGGATTTCCAATTGTTCTTCTTTAACACGTGTTCGTATTCACAACAATCTTATATCTGGGACTATCCCACCTGGCTTTGGAAGCCTCTCAAATCTTCAAAGGCTGGAATTGGCAAAGAACAACCTCAGTGGCCAGATTCCCATAGATATTACGTCATCCACCTCACTTTCTTTCATTGATGTGTCTTGGAACCATCTAGACTCTTCTCTACCATCTGGAATTCTCTCCATTCCCACCCTTCAAAACTTCATTGCCTCCAACAACAACCTGGGAGGTAACATCCCAGATGAGTTCCAAGACTGTCTGTCTCTCTCTGTGCTGGATCTTTCAGACAACCTTATATCCGGCAAAATCCCAGAAAGCGTTGCCTCTTGCCAAAAACTAGTCAAACTGAGTCTCAAAAACAACCACTTAACTGGGGAAATCCCAAAATCAATCACCGACATGCCCACCTTAGCCATTCTTGATGTCTCCAACAATTCACTTTCTGGTCACATACCTGAAAACTTTGGCACATCCCCTGCTCTTGAAATGCTCAATCTCTCCTACAACAATCTCTCAGGTCCATTACCCTCAAATGGGATTCTCATGACCATAAATCCAAATGATCTCGTCGGAAATCCCGGTCTCTGCGGAGGAATTCTTCCTCCATGTTCTCAGAATCTCACTTTCACAGCGCTGAAAAGGAGCTCACACATGAAGCACATCATAATTGGCTTCATCACTGGCATCTCAGTGATTCTATCTCTTACCATAGCATACATAACTGGTAGATTTTTATACAACAAATGGTACTTATGCAACAGTTTCATCCACGACTGGTTCAAAAGCAGCAATTCAGAATGGCCATGGAGGCTAGTGGCATTCCAGAGGGTTAGCTTCACCAGCAGTGACATTCTTTCTTGCATAAAGGAACCCAACATCATAGGCATGGGAAGCACTGGGATTGTCTACAAAGCAGAAATTCACAGACCTCACGTGACTGTAGCAGCGAAGAAACTGTGGAGGTCAGGAACAGACGTAGAAGAAAACGGGAATGATGTGCTGAGAGAAGTGAACCTCCTAGGAAGACTCAGACATAGGAACATTGTGAGGCTTCTGGGGTATGTTCACAATGAAAGGGACGTGATGATGGTGTATGAATACATGCCCTGTGGGAATCTTGGAACAGCACTACATGGTAAGCAAGGTGAAAGGTTACTGGTGGACTGGGTTTCCAGGTACAATATAGCAGTGGGAATCGCACAAGGTCTTAATTATCTTCACCATGATTGTCACCCACCAGTTATTCACAGAGACATCAAGTCTAATAATGTACTCCTTGACGCAAATCTGGAGGCAAGGATAGCAGATTTCGGGTTAGCCAAGATGATGATCCACAAGAATGAGACAGTTTCAATGGTGGCCGGATCTTATGGATATATCGCACCAGAATATGGATACACTCTGAAGGTGGACGAGAAGATTGACATATACAGTTATGGAGTGGTACTTCTGGAGCTGCTAACAGGGAAGAAGCCATTAGAGGCGTCATTTGAAGAGTGTGTAGGCATAGTTGAGTGGGTGAGAAAGAAGAGGAGCAAGGGAGGGTTAGAAGAAGCACTGGACCCCACCATAGCAGGAAGGTGCAAACACGTCCAAGAAGAGATGCTTCTTGTTCTCAGGATTGCTCTTCTTTGTACAGCAAAGCTTCCAAAGGAAAGACCTTCCATGAGAGACATTGTCACAATGCTTGGAGAGGCAAAACCCCGAAGAAAAAGCATTTGTCAAAATGGAGTAAACGAAGGTGGCAAGGAAAAGCCAGTTTTTACCACCTCGCCCATACTAGGCCTTCTCCAGTAA 3042 0.4431 MKTLLLFLCCYIGVFVVFNVGARGDELSTLLSIRSSLVDPMKHLKDWQVGNSGSSFAHCNWTGVWCNSEGFVERLELSNMNLSGRVSEHVQGLSSLSFFNISCNNFASSLPKSLSNLTSLKSFDVSQNYFTGRFPSGLGRASGLRSVNASSNNFLGFLPEDLGNATMLESLDFRGSYFEGSIPKSFRNLQKLTFLGLSGNNFTGKIPKELGGLSSLETLILGYNEFEGEVPSEFGNLTNLKYIDLAVGSLSGRIPPELGKLKKLTTIFLYKNKFGGKIPREIGNITSLELLDLSDNQISGEIPEELAELKNLTLLNVMTNKLTGLVPEKLGELKNLQVLELWKNSLHGPLPVNLGQNSPLQWLDVSSNSLSGEIPPGLCASGNLTKLILFNNSFLGPIPSGISNCSSLTRVRIHNNLISGTIPPGFGSLSNLQRLELAKNNLSGQIPIDITSSTSLSFIDVSWNHLDSSLPSGILSIPTLQNFIASNNNLGGNIPDEFQDCLSLSVLDLSDNLISGKIPESVASCQKLVKLSLKNNHLTGEIPKSITDMPTLAILDVSNNSLSGHIPENFGTSPALEMLNLSYNNLSGPLPSNGILMTINPNDLVGNPGLCGGILPPCSQNLTFTALKRSSHMKHIIIGFITGISVILSLTIAYITGRFLYNKWYLCNSFIHDWFKSSNSEWPWRLVAFQRVSFTSSDILSCIKEPNIIGMGSTGIVYKAEIHRPHVTVAAKKLWRSGTDVEENGNDVLREVNLLGRLRHRNIVRLLGYVHNERDVMMVYEYMPCGNLGTALHGKQGERLLVDWVSRYNIAVGIAQGLNYLHHDCHPPVIHRDIKSNNVLLDANLEARIADFGLAKMMIHKNETVSMVAGSYGYIAPEYGYTLKVDEKIDIYSYGVVLLELLTGKKPLEASFEECVGIVEWVRKKRSKGGLEEALDPTIAGRCKHVQEEMLLVLRIALLCTAKLPKERPSMRDIVTMLGEAKPRRKSICQNGVNEGGKEKPVFTTSPILGLLQ 1013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1515 1013 Pfam Protein kinase domain 707 974 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g1515 1013 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 177 277 - -
Bisa03g1515 1013 Gene3D Ribonuclease Inhibitor 277 376 IPR032675 -
Bisa03g1515 1013 FunFam MDIS1-interacting receptor like kinase 1 787 995 - -
Bisa03g1515 1013 Pfam Leucine rich repeat 527 586 IPR001611 GO:0005515
Bisa03g1515 1013 Pfam Leucine rich repeat 407 466 IPR001611 GO:0005515
Bisa03g1515 1013 ProSiteProfiles Protein kinase domain profile. 703 985 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g1515 1013 SMART serkin_6 703 978 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g1515 1013 Gene3D Phosphorylase Kinase; domain 1 703 786 - -
Bisa03g1515 1013 ProSiteProfiles Leucine-rich repeat profile. 287 310 IPR001611 GO:0005515
Bisa03g1515 1013 FunFam MDIS1-interacting receptor like kinase 1 703 786 - -
Bisa03g1515 1013 SUPERFAMILY L domain-like 57 304 - -
Bisa03g1515 1013 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 344 982 - -
Bisa03g1515 1013 SUPERFAMILY RNI-like 244 598 - -
Bisa03g1515 1013 Pfam Leucine rich repeat N-terminal domain 25 67 IPR013210 -
Bisa03g1515 1013 ProSitePatterns Serine/Threonine protein kinases active-site signature. 829 841 IPR008271 GO:0004672|GO:0006468
Bisa03g1515 1013 Gene3D Ribonuclease Inhibitor 377 619 IPR032675 -
Bisa03g1515 1013 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 360 622 - -
Bisa03g1515 1013 Gene3D Transferase(Phosphotransferase) domain 1 787 997 - -
Bisa03g1515 1013 SUPERFAMILY Protein kinase-like (PK-like) 694 978 IPR011009 -
Bisa03g1515 1013 ProSitePatterns Protein kinases ATP-binding region signature. 709 733 IPR017441 GO:0005524
Bisa03g1515 1013 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 23 176 - -
Bisa03g1515 1013 SMART LRR_typ_2 285 309 IPR003591 -
Bisa03g1515 1013 SMART LRR_typ_2 213 236 IPR003591 -
Bisa03g1515 1013 SMART LRR_typ_2 189 212 IPR003591 -
Bisa03g1515 1013 SMART LRR_typ_2 549 573 IPR003591 -
Bisa03g1515 1013 SMART LRR_typ_2 429 453 IPR003591 -
Bisa03g1515 1013 SMART LRR_typ_2 333 357 IPR003591 -
Bisa03g1515 1013 SMART LRR_typ_2 93 117 IPR003591 -
Bisa03g1515 1013 Gene3D Ribonuclease Inhibitor 24 174 IPR032675 -
Bisa03g1515 1013 Gene3D Ribonuclease Inhibitor 175 276 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1515 Bisa-ChrBisa03 20464464 20468116 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1515 5 1012 Receptor kinase-like Gene Family AT1G08590 62.949 0.0 1268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bisa03g1515 Pkinase 2.9e-47 CL0016