Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1496 ATGGCGACCCAGGTGGTCAAAGTGAAGAGGGAGACGCTGGAAGCATGCATGACATGCCCTCTTTGTCATAAGTTGTTGAAGGATGCTACTACTATATCTCTCTGCCTTCATACGTTTTGCAGGAAGTGCATATATGAGAAACTCTCAGATGAGGAGGCAGATTGCTGTCCGGTATGCAATATTGATCTAGGCTGTCTTCCAGTGGAAAAATTGAGGCCAGATCACAATTTGCAAGATATTAGGGCAAAAATCTTCCCTCTTAAAAGAAGAAAGATTAAGGCCCCAGAAGTTCCGCCTTCAGTATCTCTGCCAGCGAAAAGGAAGGAAAGATCACTTTCGTCGTTGGTGATTACTGCTCCTAAAGTTCCATTGCAGACTGGCTTCACGGGAAAGAGAACAAAATCTGGTACAAGAAAGGCTGCTGCGTTACGGGGATGTAATTTCACTGTTGAAGAACCCATAAAGAAGGAAGAAACTTATGCTGAAGATTATCCGGATTCTAATTCTTCCATGGCTGAGCCTTCTAAGAAGAATAAGCCTACTGAAGATACAGAGAATAATGTTGAACTCACAGAAGGGAAGGTTGATCTCTGGACACCTTTGAACTGTCTTGTTGAAGCTGCCAACAGAACAAAATCCTCCAAATCAAATTCACAAGGGTCATCTCTTGCCAAATTAGAGCCTCTGACCACTCCTCAGGGTGGAGGACTAAATATGCCTGAAATTACAGCCAAATTAGAGCCATCTGCTAACATTCATAGTGAACTACGTATACCAAAAACCAAAAATAGGGATAATGGACATAAAACAAAGTTTGGAGATGACAAGGATGGAAACATCTTGCCTTCAGGACAAGTGAGGCGTAGAAGAGTGCGTCCACCTGGTCAGAAAAGAGCAGCAGCATCTGAGTCTGCCTCAGCCCAAGTTATGCTAGATGCTGCTGGGGGCAGGTGTAACAGGAAAAACAGTCCTATTTGGTTTTCATTGGTTGCTTCTGAAGACCAGAAAGGAGATGTTCCCTTGCCGCAGATTTCAGCATGCTACTTAAGAATAAAGGATGGTACTGTGCCTGTCTCGTTCATTCAAAAGTATCTTGTAAAGAAACTTAATCTTGCCAGCGAAGCAGAGGTGGAAATAATGTGCCGTGGGCGACCAGTGCTGCCATCTTTGCAACTGCATAATTTAGTAGATCTGTGGTTCAGGACAGCATCAACCTCTAAAAAGATACCTGCGTCTGTGGGCTCCTCGGCTAAGGATTTTGTTATGGTTTTATCATATTGTCGAAAGGCCCTAGCTTCTTGA 1302 0.437 MATQVVKVKRETLEACMTCPLCHKLLKDATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLGCLPVEKLRPDHNLQDIRAKIFPLKRRKIKAPEVPPSVSLPAKRKERSLSSLVITAPKVPLQTGFTGKRTKSGTRKAAALRGCNFTVEEPIKKEETYAEDYPDSNSSMAEPSKKNKPTEDTENNVELTEGKVDLWTPLNCLVEAANRTKSSKSNSQGSSLAKLEPLTTPQGGGLNMPEITAKLEPSANIHSELRIPKTKNRDNGHKTKFGDDKDGNILPSGQVRRRRVRPPGQKRAAASESASAQVMLDAAGGRCNRKNSPIWFSLVASEDQKGDVPLPQISACYLRIKDGTVPVSFIQKYLVKKLNLASEAEVEIMCRGRPVLPSLQLHNLVDLWFRTASTSKKIPASVGSSAKDFVMVLSYCRKALAS 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1496 433 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIP1 1 430 IPR044807 GO:0004842
Bisa03g1496 433 Gene3D - 306 409 - -
Bisa03g1496 433 SMART ring_2 19 59 IPR001841 -
Bisa03g1496 433 MobiDBLite consensus disorder prediction 209 304 - -
Bisa03g1496 433 MobiDBLite consensus disorder prediction 157 193 - -
Bisa03g1496 433 ProSiteProfiles Zinc finger RING-type profile. 19 60 IPR001841 -
Bisa03g1496 433 MobiDBLite consensus disorder prediction 209 228 - -
Bisa03g1496 433 SUPERFAMILY RING/U-box 12 84 - -
Bisa03g1496 433 MobiDBLite consensus disorder prediction 257 276 - -
Bisa03g1496 433 ProSitePatterns Zinc finger RING-type signature. 35 44 IPR017907 -
Bisa03g1496 433 MobiDBLite consensus disorder prediction 176 190 - -
Bisa03g1496 433 Pfam Zinc finger, C3HC4 type (RING finger) 19 59 - -
Bisa03g1496 433 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 3 111 IPR013083 -
Bisa03g1496 433 CDD RING-HC_PCGF 17 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1496 Bisa-ChrBisa03 20200365 20205247 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1496 5 352 C3H Transcription Factor Family AT2G30580 44.414 1.62e-88 271