Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1492 ATGATAAATTTTGAAGAGACTGAACTAAGGCTTGGCTTGCCCGGTGCTTCTGCTTCTGCTTCTGCAGCTGCTAATGACGCTGACTCCGGTCTTAAGAGTTCCTGGAGCACTGGCAGTGGCAAGAGAGGCTTCTCCGACACCACTGTGGATTTGAAGCTCAATCTCTCTTCCAACACTAACCAGTTACTCGACAAGCCCACAGACAACACCTCCTCTGCAACTGCCTCTGCTCCTCCCTCTAACGACCCTGCCAAGCCTCCCGCTAAGGCGCAAGTAGTGGGTTGGCCACCCGTTCGGTCCTTCCGAAAGAACATCGTGACCGTCCAAAAGAACAACAAGGATGATGCCGGAACCGCCGCGAGTGGCAGCGCGTCGTTCGTGAAAGTGAGCATGGACGGTGCACCCTATCTACGCAAAGTGGACTTGAAGATGTACAAGAGCTACCACCAACTCTCTGATGCACTTGCTAAAATGTTCAGCTCCTTCACCATCGGAAACTATGGCTCTCAGGGCATGAAGGACTTCATGAATGAGAGCAAATTGATAGATCTCTTGAATGGATCTGACTACGTACCGACTTACGAAGACAAGGATGGTGATTGGATGCTTGTTGGTGACGTCCCATGGGAAATGTTCGTGGAATCATGCAAACGCCTCCGTATAATGAAAGGATCCGAGGCAATTGGGCTAGCTCCAAGGGCGGTTGAAAAGTGCAAGAACAGAAGCTGA 729 0.5089 MINFEETELRLGLPGASASASAAANDADSGLKSSWSTGSGKRGFSDTTVDLKLNLSSNTNQLLDKPTDNTSSATASAPPSNDPAKPPAKAQVVGWPPVRSFRKNIVTVQKNNKDDAGTAASGSASFVKVSMDGAPYLRKVDLKMYKSYHQLSDALAKMFSSFTIGNYGSQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAIGLAPRAVEKCKNRS 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1492 242 ProSiteProfiles PB1 domain profile. 124 224 IPR000270 GO:0005515
Bisa03g1492 242 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 3 229 IPR003311 GO:0005634|GO:0006355
Bisa03g1492 242 MobiDBLite consensus disorder prediction 1 93 - -
Bisa03g1492 242 Pfam AUX/IAA family 6 233 IPR033389 -
Bisa03g1492 242 FunFam Auxin-responsive protein 119 234 - -
Bisa03g1492 242 MobiDBLite consensus disorder prediction 22 79 - -
Bisa03g1492 242 Gene3D - 119 236 - -
Bisa03g1492 242 SUPERFAMILY CAD & PB1 domains 121 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1492 Bisa-ChrBisa03 20139196 20141188 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1492 113 232 B3 DNA Binding Superfamily AT4G23980 30.833 5.60e-09 54.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Bisa03g1492 AUX_IAA 6.2e-88 CL0072