Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1465 ATGGGGAAGGCGAGCAAGTGGATAAGAAACTTTCTGATAGGGAAAAAGGAAGAGAGATACAAGCAGATTGATGGAGCAGGCCAGAGGGGTTGTAGTGAGGTGGAAAGCTCCAAGGTGAAGCGAAAATGGAGCTTCGGAAGAAGATCAGGGAAAGGTGCAGAGCAGAAAGTTTCCACCTCTTTCGATTTAACTGACTCTGCTAAGCACCAAATAATACAAGCCTTGCTGCAAATTCGGCCTTCACCTTCACACACACTTCCGACACCCCCACCATTTTCTGACATTGAAAATGCTGCTGCAACAAAGATTCAGGCTGCTTTTCGCTCTTATTTGGGAAGAAAAGCTTTGCATGCTTTGAGGGGACTGGTCAAGTTACAAGCATTGGTGAGAGGTCATCTTGTGAGGAAACAAACAACTGCCACGCTTCGCAGCATGCATGCCTTGATGGCAATACAAGTTAGAGCCCGAATTCACAGAATTCAGATGCAACAAGAATCAAATCTTCTTAGAGAAATAAACAAAGATTCTAAGGATATGAGTCTGAGGGAAATGCTGCGAGTTTTGAGAAGCAGGAGTGGCCCTCTGGATCGTCCTCCTCGTAAGAGCATAGAGCATCCTTCTGTTTCAAAGCGACACCATCGATACACAGCACCAAACAGCCCAGAAGACTACATGGCCATGTTTGGATTAAACCCAGCAAATTCCCTATCTACTTCTCTTCGCCATAATCAATCATGGGAACCAAATTACATGACAGAGACAGAGTCGTCAAGGGCCAAAGCTAGGTCTGAGAGTGAACCAAAACAACGACCCAGAAGAAGCGTGAGACACGGTAACAAGCCTACAGAATCTATGAAGGACTTTATCAGCCCATTGGATGGTGGAAGGCAATATATGTCTTCAAACTCCACTCGCTTCAATCATGGAAAGATGGGTTTATTGGGCTAA 948 0.4525 MGKASKWIRNFLIGKKEERYKQIDGAGQRGCSEVESSKVKRKWSFGRRSGKGAEQKVSTSFDLTDSAKHQIIQALLQIRPSPSHTLPTPPPFSDIENAAATKIQAAFRSYLGRKALHALRGLVKLQALVRGHLVRKQTTATLRSMHALMAIQVRARIHRIQMQQESNLLREINKDSKDMSLREMLRVLRSRSGPLDRPPRKSIEHPSVSKRHHRYTAPNSPEDYMAMFGLNPANSLSTSLRHNQSWEPNYMTETESSRAKARSESEPKQRPRRSVRHGNKPTESMKDFISPLDGGRQYMSSNSTRFNHGKMGLLG 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1465 315 SMART iq_5 118 139 IPR000048 GO:0005515
Bisa03g1465 315 SMART iq_5 95 117 IPR000048 GO:0005515
Bisa03g1465 315 Pfam IQ calmodulin-binding motif 123 137 IPR000048 GO:0005515
Bisa03g1465 315 Pfam IQ calmodulin-binding motif 98 116 IPR000048 GO:0005515
Bisa03g1465 315 PANTHER IQ-DOMAIN 5-RELATED 1 283 - -
Bisa03g1465 315 MobiDBLite consensus disorder prediction 189 218 - -
Bisa03g1465 315 ProSiteProfiles IQ motif profile. 120 147 IPR000048 GO:0005515
Bisa03g1465 315 MobiDBLite consensus disorder prediction 245 294 - -
Bisa03g1465 315 Gene3D - 93 148 - -
Bisa03g1465 315 MobiDBLite consensus disorder prediction 257 283 - -
Bisa03g1465 315 ProSiteProfiles IQ motif profile. 96 124 IPR000048 GO:0005515
Bisa03g1465 315 MobiDBLite consensus disorder prediction 189 220 - -
Bisa03g1465 315 Pfam Protein of unknown function (DUF4005) 216 278 IPR025064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1465 Bisa-ChrBisa03 19852819 19853941 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1465 1 271 IQD Protein Family AT4G14750 36.577 4.75e-37 135