Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1464 ATGGCGGAGGAGCTTCTGCAACTTCGTCTGCTGCTTCTTCTCCTCCTCCACCTTCTCCCTCAGCAACGTTGTCCCTGCTTGGATTTCTCTTCGGTTTCTGTGCTTGCAATTTTTACTGTTGCTGCTTACTTTGATTCACTCCGATTTTACTCTTTCCTCCTCCTGTATTTGACTTCGCCGAAACTGGTGGTCTGTTCTAGCTTTCATTCTGTGCTTGTTGCAATGCTTTGTTGTGTTTTCGCCAATGCTAAGGCTGATTGGAAGAAATGTGGGAAAAGAAGTGTGGAGAGGGTCAATCTTTTACTTGTTGAACAAATGGAGCAGTATGAAATACTTGAGCAAATTGGAAAAGGTGCTTTCGGTTCTGCTCTTCTTGTGAGGCATAAGCATGAGAAGAAAAAATATGTGCTGAAGAAAATTCGCCTTGCCCGCCAAACCGAGCGATCTCGGAGATCTGCACACCTGGAGATGGAGCTCATCTCTAAATTTAGAAATCCATTTATTGTGGAGTATAAAGATTCATGGGTAGAAAAGGGTTGCTATGTGTGCATTATTATAGGTTACTGTGAGGGTGGAGATATGGCTGAAGCTATAAAGAAAGCTAATGGTGCTCTTTTTCCCGAAGAGAAACTCTGTAAGTGGCTTGTTCAACTTCTCATGGCACTTGACTACTTGCACATGAACCATATTCTTCATCGTGATGTCAAGTGTTCAAATATATTCTTGACAAAAGATCAAGACATACGCCTTGGTGATTTTGGACTTGCCAAAATATTGACTTCGGATGACCTTGCTTCATCTGTTGTGGGAACTCCTAGCTACATGTGCCCTGAGCTCCTTGCTGATATACCTTATGGTTCTAAGTCAGATATTTGGTCTTTGGGATGTTGTATATATGAAATGACAGCCCACAAGCCTGCTTTTAAAGCATTTGATATACAGGCACTAATCAACAAGATTAACAAGTCCATAGTGGCCCCGCTGCCAACAAAGTATTCTGGTGCATTTCGAGGTCTTGTTAAAAGGATGCTACGGAAAAATCCAGAGCTTAGACCTAGTGCTGCGGAGCTACTTGGGCACCCTCATCTTCAACCTTATGTTCTCAAGATCCATCAAAAAATCAATAACCCCAGGCGAAGTACACTCCCAGCCCATTGGCCAGAATCCAACTACATGAAGAAAACTAGATTTTTGGAGCCAGAAGATGATCCTGCTTCCATCTACAGGAGTAAGCGGCATTCTTTCAGCAATGATCGGACTCTAAATCCTAGTGTATCTGGTGCTGAGCAAGATTCTGTATGCTCTACTCTAGAAATAGATTGTACACCAGATCATTTGAATCAGCGGTTAGCAGAACTGTCTGTTGGGGATAGCCCTAAAGTGAATGCAGTCCGTAAGCCAGCTGTTTCCAGAACTTCAAGTATTGCCAAGACTCCAAGACTGACTTCATCAAAAGCTTCTACCAGCCCTAAGAAACCAATGGAGTTTTCAAAGAATCGTGGGCTGCTTCCTATTTCATGCAATGCCAGAAAATCAGTCCATACAACTCGCAGAGCATCATTTCCATTGCCAACAAAAGATTGTGTTCAACAATCTCCTCATCGGCGTGGTGCTCTTGGCCATACAAATTCACCTGATATTTCAGTCAACTCTCCCCGAATTGATAGGATAGCTGAATTCCCATTAGCATCATATGAGGATCCGCTGCTTCCCATTAATAGAACGTCACAAACCTCTGTGCAGGGTTCTTCAGGTTCCCCACCCTGTGGTGATCATTCAATCACGAAAGACAAATGTACAGTTCAGGTATGTGATAAAACCACTGTCAGGCCTACTTTGATGGATGCTTGGCAGAGATCCAAGCGTAGCATGTATCAGGAAAATGATGAGGTGAAAAGTGGCTCCTCTGATCAAAATGCAACTGCTGGAGCATCAAGCCGTACCTCTTCTGACTGGCGCCGCCGGCATTTTGACACTTCATCATACCAACAGAGGGCTGATGCCTTGGAAGGGATGCTCGAATTTAGTGCAAGGTTGCTACAACAAGAAAGGTATGAAGAACTTGGGGTTTTGTTGAAACCATTTGGGCCCGGGAAGGTCTCCCCACGGGAAACTGCTATCTGGTTGAGTAAGAGCTTCAAAGAGAATACTGTCAACCGTGAAGAGTCCTTTTAA 2175 0.4386 MAEELLQLRLLLLLLLHLLPQQRCPCLDFSSVSVLAIFTVAAYFDSLRFYSFLLLYLTSPKLVVCSSFHSVLVAMLCCVFANAKADWKKCGKRSVERVNLLLVEQMEQYEILEQIGKGAFGSALLVRHKHEKKKYVLKKIRLARQTERSRRSAHLEMELISKFRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGALFPEEKLCKWLVQLLMALDYLHMNHILHRDVKCSNIFLTKDQDIRLGDFGLAKILTSDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTAHKPAFKAFDIQALINKINKSIVAPLPTKYSGAFRGLVKRMLRKNPELRPSAAELLGHPHLQPYVLKIHQKINNPRRSTLPAHWPESNYMKKTRFLEPEDDPASIYRSKRHSFSNDRTLNPSVSGAEQDSVCSTLEIDCTPDHLNQRLAELSVGDSPKVNAVRKPAVSRTSSIAKTPRLTSSKASTSPKKPMEFSKNRGLLPISCNARKSVHTTRRASFPLPTKDCVQQSPHRRGALGHTNSPDISVNSPRIDRIAEFPLASYEDPLLPINRTSQTSVQGSSGSPPCGDHSITKDKCTVQVCDKTTVRPTLMDAWQRSKRSMYQENDEVKSGSSDQNATAGASSRTSSDWRRRHFDTSSYQQRADALEGMLEFSARLLQQERYEELGVLLKPFGPGKVSPRETAIWLSKSFKENTVNREESF 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1464 724 MobiDBLite consensus disorder prediction 524 550 - -
Bisa03g1464 724 CDD STKc_Nek 108 363 - -
Bisa03g1464 724 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 106 674 - -
Bisa03g1464 724 FunFam Serine/threonine-protein kinase Nek3 191 437 - -
Bisa03g1464 724 ProSitePatterns Serine/Threonine protein kinases active-site signature. 230 242 IPR008271 GO:0004672|GO:0006468
Bisa03g1464 724 Gene3D Transferase(Phosphotransferase) domain 1 191 422 - -
Bisa03g1464 724 Gene3D Phosphorylase Kinase; domain 1 88 188 - -
Bisa03g1464 724 MobiDBLite consensus disorder prediction 629 648 - -
Bisa03g1464 724 MobiDBLite consensus disorder prediction 464 498 - -
Bisa03g1464 724 SUPERFAMILY Protein kinase-like (PK-like) 105 410 IPR011009 -
Bisa03g1464 724 ProSiteProfiles Protein kinase domain profile. 109 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g1464 724 Pfam Protein kinase domain 109 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g1464 724 SMART serkin_6 109 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g1464 724 MobiDBLite consensus disorder prediction 623 656 - -
Bisa03g1464 724 FunFam Serine/threonine-protein kinase Nek2 106 188 - -
Bisa03g1464 724 ProSitePatterns Protein kinases ATP-binding region signature. 115 138 IPR017441 GO:0005524
Bisa03g1464 724 MobiDBLite consensus disorder prediction 467 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1464 Bisa-ChrBisa03 19846861 19852018 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1464 115 364 MAP Kinase Kinase Kinase AT1G53570 31.373 6.87e-35 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Bisa03g1464 Pkinase 1.2e-62 CL0016