Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1462 ATGTTCGATGGAGTAGTAGACCAGTTCCACCAAATCATAGCACCACCAAGAACCTCATCATCGCTTCCACTTCACTTATCTTTCCCTCTCCATGCCTCTTCTCCAACACCACCCAATAATAACACTCACACTGCTACCTTCCCGACTACTCCCTTTGATTCTTACAACGATACCCCTTCTCATCACTTCCAGCTCCAACAATCCAATCCTATCTTGCACCACCCCAAACATCATCACAACTTGGAGATTCCGACAACAGAAAGAGAAAGGCAACAATTACCCCAGCTCATCGACTCCTGCTGGACTCACGACGAAGTGCTCGCGCTTTTCAGGATCAGATCTACTATGGACACTTGGTTCCCAGACCTCACTTGGGAACACGTCTCAAGGAAGCTAGCAGACCTTGGATTTAAGAGGAGTGCAGAGAAGTGCAAGGAGAAGTTCGAAGAAGAAAGCAGATATTTGAACAACAACATTAATTACAACGACAATTACCGCTTCCTGAGCGAGTTTGAACAAGAGCTTTATGAAGAAGACCAAGTTGGTCACCATAATCCAGACAACGAGCCAAGGGAGGGACAACAAGACAAGACGACGTGGACTCATGCCTTGGAACAGCCTTATTCCACTCACGACACATCAGCACGAAAACCAAAGGACGTTAGGAGGAAGAGGAAGAAGCAGCAGCACGATGAAGATAAGTTCGAGGTGTTCAAGGGCTTCTGCGAGAACGTTGTGAACAAGATGATGGCTCAGCAGGAGGAGATGCATAACAAGCTTCTGGAGGACATGATCAAGAGGGACGAGGAGAAGTTCGCAAGAGAGGATGCTTGGAAGAAGCAAGAGATCGATAGGATGAACAAAGAGCTCGAAATGATGGCACGTGAGCAAGCCGTCGCAGGCAACCGGCAAGCCACCGTTCTAGAGTTCTTGAAGAAACTCGCGTCAACCTCTCATAAAGTAACAAAAGAAAACCCTAATCTCGACCCAGTACCACCTTCTTATACAATGGCTCTGAATCATCAAGATAGCGCCACTTGCACAGAAAACCCTAGCTCGAGTGTTTCTTGGGACACACAAGAAGTGCCAGATCAACTGCAGAACCCTAGTTCTGTGAATTCAGTTATTACAACAATGTCGACGAGGAGTGAGAAAGGAGGTGAAGTAGGTAGAAGATGGCCGAGGGATGAAGTGCTAGCTTTGATAAACCTGAGGTGCAGTGTAAGTAACAATAGTAGGAGTCAAGAGAAGGAGGGGAACAGTAATAAGGCTCCGTTGTGGGAGAAAATATCACAAGGGATGTTAAAGGTAGGGTACAAGAGGACTGCCAAAAGGTGCAAGGAGAAATGGGAGAACATAAACAAGTATTTCAGGAAAACCAAGGATGTTAAGAAGAAGAGGTCGCTGGACTCCAGGACTTGTCCTTATTTCCATCATCTCACCACTTTGTATACTCAAGGAAAGCTCGTTTCACAATCTGAAATACCCCAGAATATCCCAGAAATGCCACAAGCTGACCCTTCTTCTCAAGTTGTGCATGTCAATGGAGGTGAGAAAATTGTGATGCAACTGCCTGAAGAAGCTTTCGATGTGGATCAACCCTTCTAA 1608 0.4608 MFDGVVDQFHQIIAPPRTSSSLPLHLSFPLHASSPTPPNNNTHTATFPTTPFDSYNDTPSHHFQLQQSNPILHHPKHHHNLEIPTTERERQQLPQLIDSCWTHDEVLALFRIRSTMDTWFPDLTWEHVSRKLADLGFKRSAEKCKEKFEEESRYLNNNINYNDNYRFLSEFEQELYEEDQVGHHNPDNEPREGQQDKTTWTHALEQPYSTHDTSARKPKDVRRKRKKQQHDEDKFEVFKGFCENVVNKMMAQQEEMHNKLLEDMIKRDEEKFAREDAWKKQEIDRMNKELEMMAREQAVAGNRQATVLEFLKKLASTSHKVTKENPNLDPVPPSYTMALNHQDSATCTENPSSSVSWDTQEVPDQLQNPSSVNSVITTMSTRSEKGGEVGRRWPRDEVLALINLRCSVSNNSRSQEKEGNSNKAPLWEKISQGMLKVGYKRTAKRCKEKWENINKYFRKTKDVKKKRSLDSRTCPYFHHLTTLYTQGKLVSQSEIPQNIPEMPQADPSSQVVHVNGGEKIVMQLPEEAFDVDQPF 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1462 535 MobiDBLite consensus disorder prediction 203 231 - -
Bisa03g1462 535 ProSiteProfiles Myb-like domain profile. 392 454 IPR001005 -
Bisa03g1462 535 Gene3D - 393 459 - -
Bisa03g1462 535 Gene3D - 101 155 - -
Bisa03g1462 535 ProSiteProfiles Myb-like domain profile. 93 152 IPR001005 -
Bisa03g1462 535 PANTHER FI21293P1 75 505 - -
Bisa03g1462 535 SMART sant 97 154 IPR001005 -
Bisa03g1462 535 SMART sant 389 456 IPR001005 -
Bisa03g1462 535 Coils Coil 251 271 - -
Bisa03g1462 535 CDD GT1 391 461 - -
Bisa03g1462 535 Pfam Myb/SANT-like DNA-binding domain 391 481 IPR044822 -
Bisa03g1462 535 Pfam Myb/SANT-like DNA-binding domain 99 154 IPR044822 -
Bisa03g1462 535 FunFam Trihelix transcription factor GT-2 101 157 - -
Bisa03g1462 535 MobiDBLite consensus disorder prediction 344 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1462 Bisa-ChrBisa03 19836532 19838602 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1462 235 486 Trihelix Transcription Factor Family AT5G28300 49.265 1.51e-75 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Bisa03g1462 Myb_DNA-bind_4 4.1e-18 CL0123