Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1428 ATGGGTGCACCGAAGAAAAGTGCGGTTAAGGCTTCGGAAGAGGCCGAGGAATTGACTCGCGTCCCCTTGCAAGCCATCCTCTTGGCTGATAGTTTTGCTACCACGTTCAGACCTATCACCCTCGAACGCCCCAAAGTATTATTACCGCTTGTAAATGTTCCCATGATAAATTACACATTGGCATGGCTCGAATCTGCCGGTGTAGAAGAGGTTTTTGTTTTCTGCTGTGCTCATTCTAAGCAAGTGATTTCTTACTTGGAGAAATCTGGGTGGCTCTCCCAACCAAATTTTACAGTCACAACGATAGAGTCGCATCATTCTGTTAGTGCGGGAGATGCTCTGCGCCTAATATATGAGCGCAATGTGATACATGGAGATTTTGTCCTAATCAGTGGAGATACGGTAAGCAACATGTCACTTACTCATGCTCTTCAAGAGCACAAGGAAAGAAGGAAGAAAGATAGTGATGCCATAATGACCATGGTCATTAAACGATCAAAACCTCATCCAGTTATTTATCAATCTCGTCTTGGTACTGATGAACTTTTCATGGCCATTGATCCTAATACCAAGCAACTTTTGTACTATGAGGATAAGGTTGACCATTTTAAAGGAACTCTACATCTTGATAAATCATTGCTCCTTGATAATCCTTCTATCTCTCTGCACCACGACAAGCAGGATTGTTATATTGACATCTGCTCACCGGAGGTCCTTAGCCTATTTACGGACAATTTTGACTATCAACATTTACGGCGCCATTTTGTCAAGGGATTGCTTCTTGATGATATTATGGGATACAAGATATTTACACATGAAATTCACTCAAATTATGCTGCAAGGATTGATAATTTTCGTAGCTATGATACTGTCAGCAAGGATATAATTCATAGATGGACCTATCCGTTGGTGCCAGATGTTAAGTTTTTTAGTAATTCTGCTACTAAACTTGAACGACAGGGAATGTATCGTGCATCAGAAATATCACAATCGCATTCTGCTGTTATTGGCCCATTTACCGTCATAGGTTTTGGCACCAAAATTGGGGATAACACTAAAATTTCAAATTCGGTTGTTGGAGAAGGATGTACAATTGGGTCAAATGTTCAGATAGAGGGATCGTACATATGGGACAATGTTACCATTGAAGATGGTTGTGAACTTAGGCATGCAATTGTATGTGATGGGGTGATTTTGAAGTCAGGAGCTGTTCTGGAACCTGGTGTGGTTTTGTCTTTCAAGGTTGTAACTGGGCGGGATTTTGTTGTTCCTTCATACTCGAAAGTATCTTTATTTCAACAGCCAGTTGAGGAAGATAGTGATGAAGAGCTGGAATATGCTGATAGTACAGGTGGTATTGCAGTGACAAGCACAGTGGACAAATCTGATGCGGAAGCTGCATCGCAAGTATTGGAGACACAATCTTGGTCTGTATCAGAGTTAGGTGCGGGTGGGGCTGGTTATGTTTGGTCAAAATGTGAAGGAGGCCATGAAGAAGAATGGAGGCATTCAGTGGCTCCAATCCCTGGTGATAAAATTTCTGAGGCAATGAAAATTTTGGAAGATGATCTGGAGTTGGCTCATGATGGCAGTGTTCTCTCACCTTCTGGAGAGCTAAAACCTGGTTCTATAGACTCAGATGCTGATGATATTGAAGATTCCAGAGATGACTCGTACTTTGAGAAAGAGGTTGAAGCTACTTTTCTCAGGGCTGTGCATGAAAACATTAAAGAAGATCATGTGATTTTAGAAGTCAACTCTCTAAAGTTGTCATACAATAAATTACCAGCTGATTGTGCTGGAGCTATATTTCATGCTATGATGAAGTACGCCTTAGGCATCCCCCATAGTTCAGCTGGTAGCTTGGTTCAGACTGTTGAGGGTGTACTTACAACATGGAAAAAGCTTCTAGCATCCTACCTGGCTGACATTGATGAACAGATTGAAGTGATACTAAAATTTGAAGAAATGTGCTTGGAATCTGCGAAGGATTTTGCTCCATTATTTACAAAGATTTTGAGTATTATGTATGACAAAGATATCATACAGGAAGATGCTGTTTTAAGTTGGGAAGATGAGAAGAGAGACGCAGACGAGTCAGATAAAGTTTTTGTCAAGCAGGCCCAGACATTTATTCAATGGTTAAGAGAAGCTCCCGAAGAAGACGACGATGAGGAAGAGTAG 2184 0.4121 MGAPKKSAVKASEEAEELTRVPLQAILLADSFATTFRPITLERPKVLLPLVNVPMINYTLAWLESAGVEEVFVFCCAHSKQVISYLEKSGWLSQPNFTVTTIESHHSVSAGDALRLIYERNVIHGDFVLISGDTVSNMSLTHALQEHKERRKKDSDAIMTMVIKRSKPHPVIYQSRLGTDELFMAIDPNTKQLLYYEDKVDHFKGTLHLDKSLLLDNPSISLHHDKQDCYIDICSPEVLSLFTDNFDYQHLRRHFVKGLLLDDIMGYKIFTHEIHSNYAARIDNFRSYDTVSKDIIHRWTYPLVPDVKFFSNSATKLERQGMYRASEISQSHSAVIGPFTVIGFGTKIGDNTKISNSVVGEGCTIGSNVQIEGSYIWDNVTIEDGCELRHAIVCDGVILKSGAVLEPGVVLSFKVVTGRDFVVPSYSKVSLFQQPVEEDSDEELEYADSTGGIAVTSTVDKSDAEAASQVLETQSWSVSELGAGGAGYVWSKCEGGHEEEWRHSVAPIPGDKISEAMKILEDDLELAHDGSVLSPSGELKPGSIDSDADDIEDSRDDSYFEKEVEATFLRAVHENIKEDHVILEVNSLKLSYNKLPADCAGAIFHAMMKYALGIPHSSAGSLVQTVEGVLTTWKKLLASYLADIDEQIEVILKFEEMCLESAKDFAPLFTKILSIMYDKDIIQEDAVLSWEDEKRDADESDKVFVKQAQTFIQWLREAPEEDDDEEE 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1428 727 SMART 542_3 634 721 IPR003307 GO:0005515
Bisa03g1428 727 ProSiteProfiles W2 domain profile. 554 725 IPR003307 GO:0005515
Bisa03g1428 727 FunFam Trimeric LpxA-like enzyme 316 449 - -
Bisa03g1428 727 FunFam Translation initiation factor eIF-2B subunit epsilon 12 303 - -
Bisa03g1428 727 CDD eIF-2B_epsilon_N 23 239 IPR035543 -
Bisa03g1428 727 Pfam Nucleotidyl transferase 25 163 IPR005835 GO:0009058
Bisa03g1428 727 Gene3D - 549 726 - -
Bisa03g1428 727 Pfam eIF4-gamma/eIF5/eIF2-epsilon 646 725 IPR003307 GO:0005515
Bisa03g1428 727 CDD W2_eIF2B_epsilon 556 718 IPR044123 GO:0005085|GO:0031369
Bisa03g1428 727 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT EPSILON 10 726 - -
Bisa03g1428 727 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 6 305 IPR029044 -
Bisa03g1428 727 SUPERFAMILY Nucleotide-diphospho-sugar transferases 20 369 IPR029044 -
Bisa03g1428 727 SUPERFAMILY Trimeric LpxA-like enzymes 267 428 IPR011004 -
Bisa03g1428 727 Gene3D Hexapeptide repeat proteins 319 425 - -
Bisa03g1428 727 SUPERFAMILY ARM repeat 560 718 IPR016024 -
Bisa03g1428 727 FunFam Translation initiation factor eIF-2B epsilon subunit 551 726 - -
Bisa03g1428 727 CDD LbH_eIF2B_epsilon 341 419 - -
Bisa03g1428 727 MobiDBLite consensus disorder prediction 530 552 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1428 1 718 Eukaryotic Initiation Factors Gene Family AT2G34970 65.565 0.0 953