Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1415 ATGCAAATTTTCTTGACAGTCGGAGCCTATGAAAATGACGACTTAATTCCGGTTTTGATTTTTCGGTTTACAATCACTTCATTATGTGCGAACTTTCATGGCGATTGCGGTGACCAAACAGTTGGTTCTTTTTGATACAATCTGCTTATGATTTTCAAGCCCGAATGTGTGCGTGAGTCTAAAGCTTCTCTTCGTCAGAATTTTGGAAGTTTCCGAGCCTTAGCTTCTGTTTGTGTTGCTAAAACTAGACATTATGTGTTATGTAGGGACAATCAAAAGAACTCTGCTAACAAAGATGCTTCAGCAGTTAAACACAAGAAACGAGGCTCTCTATTCTGTTCCTTTGCTTCTGCACAAGACTTGAGAGACTTTGAGTTGGAGAAGGAGAAAGAAGACGCTTCATCTCCCAGAGGAGTTTTAGAAGCATGCATTCGAGACTTTGACTCTCTACAATCACCTGATTCGACCCGTTGTTCAAAGTCAAAGACACTGCTTAATTGGAGCAAATATTTCAAAAGCTGGAAAAAATCATTCAAGCGCCTATCTTCCTCAAAGATACCAAAAGGCAAAAGCAAAAGCACAAGAGAAAAGCCTAATCTGAAAAATGTATACAAATTCAGGTCTTCATTGGTCACTTTTAGAGTCTCTGAACTCAGAATTGCAACCAACAATTTTAGTAATGAAAATTTGATTGGAAGAGGTGGCTATTCTGAAGTGTACAAAGGATGTCTCAAAGATGGGAGCCTAATAGCTGTGAAGCGACTTACTAAAGGGAATCTTGAAGAGAGAACTGCTGGTTTTCTATCTGAGCTAGGCATTATTGCTCATGTAGATCATCCAAATACTGCAAAGATTATTGGGTGTGATGCAGGAGGAATGCATCTTGTGTTCCGACTATCTAAATTGGGAAGCTTAGGATCTCTTCTTCATGGTTCAAAAGATACCAAACTAGATTGGAGTAAAAGGTATAAGATTGCTCTAGGCATAGCTGATGGCCTCCTCTACCTTCATGAGACTTGTCATAGGCGAATCATTCATAGAGATATTAAGTCAGATAATATCCTGCTCACAGAAAATTATGAGCCCCAGATTTGTGATTTTGGGTTGGCAAAGTGGTTACCCAGACAATGCTCTCACCATAATGTTACAAAATTTGAAGGCACGTTTGGGTATTTTGCTCCAGAATATTTCATGCATGGCATAGTCGACGAGAAAACTGATGTCTATTCTTTTGGGGTTCTACTCTTGGAGATTATATCTGGGCGTCCAGCTGTAGATAAAGACCAGCTTAGTGTTGTAATATGGGCCAAGCCTTTTCTCGATGACAATAATGTTAAGGAGCTTGCCGATCCCTCTCTTGGCGATGACTACAACCAAGAAGAGATGGATCGTGTTGCTTTGACTGCATCTCTGTGTATTGAGCACTCTCCTATCTTACGTCTCTCCATGAGTCAGGTTGCAGTATTGCTAAGAGGTGATGAGTACACCAACACCATCGAAACTACAACAGAGAGCGAGAGACCATCTTTCCAAAGAACATACTCAGAGGAGCTTCTAGATAAGCTAGAATACAACTCAACCAAATACCTAAATGATCTCAATCAACACAAGCGAATTGTCTTGGGGACACTGATGAAAGCAGATTTATAA 1650 0.4018 MQIFLTVGAYENDDLIPVLIFRFTITSLCANFHGDCGDQTVGSFXYNLLMIFKPECVRESKASLRQNFGSFRALASVCVAKTRHYVLCRDNQKNSANKDASAVKHKKRGSLFCSFASAQDLRDFELEKEKEDASSPRGVLEACIRDFDSLQSPDSTRCSKSKTLLNWSKYFKSWKKSFKRLSSSKIPKGKSKSTREKPNLKNVYKFRSSLVTFRVSELRIATNNFSNENLIGRGGYSEVYKGCLKDGSLIAVKRLTKGNLEERTAGFLSELGIIAHVDHPNTAKIIGCDAGGMHLVFRLSKLGSLGSLLHGSKDTKLDWSKRYKIALGIADGLLYLHETCHRRIIHRDIKSDNILLTENYEPQICDFGLAKWLPRQCSHHNVTKFEGTFGYFAPEYFMHGIVDEKTDVYSFGVLLLEIISGRPAVDKDQLSVVIWAKPFLDDNNVKELADPSLGDDYNQEEMDRVALTASLCIEHSPILRLSMSQVAVLLRGDEYTNTIETTTESERPSFQRTYSEELLDKLEYNSTKYLNDLNQHKRIVLGTLMKADL 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1415 549 PANTHER OS08G0249100 PROTEIN 98 535 IPR046958 -
Bisa03g1415 549 SMART serkin_6 225 496 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g1415 549 Gene3D Phosphorylase Kinase; domain 1 185 297 - -
Bisa03g1415 549 Gene3D Transferase(Phosphotransferase) domain 1 301 518 - -
Bisa03g1415 549 SUPERFAMILY Protein kinase-like (PK-like) 199 490 IPR011009 -
Bisa03g1415 549 Pfam Protein tyrosine and serine/threonine kinase 228 423 IPR001245 GO:0004672|GO:0006468
Bisa03g1415 549 ProSitePatterns Serine/Threonine protein kinases active-site signature. 344 356 IPR008271 GO:0004672|GO:0006468
Bisa03g1415 549 ProSitePatterns Protein kinases ATP-binding region signature. 231 253 IPR017441 GO:0005524
Bisa03g1415 549 ProSiteProfiles Protein kinase domain profile. 225 496 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g1415 549 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 301 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1415 Bisa-ChrBisa03 19123695 19127218 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1415 174 492 Receptor kinase-like Gene Family AT1G53420 40.979 1.73e-69 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Bisa03g1415 PK_Tyr_Ser-Thr 1.5e-38 CL0016