Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1399 ATGGAAGCAGTGCTCTATCCTCAAGACCCTTTCTCTTATGGCGCCAAAGACCTCTTCAACTACACCTGGGCCTCCTACCAACAAGACGACCATCCCTCTCTCGATTTTCTCGACAGCCAAACACACAGCAATTACGCCTATGCAGATTGGGATTGCTCGACCCCATCGTCCATGTTACCCCAGTTGAACGAAGTTCCTGTTTCGAACCCTTCCTCTGAAGCCAACAACAATGGCTCCAATTCAATCAGCGAAACCCACAACATGGATGCCTCAGCCTCCATGCCCGCTCGTCCCAAGAGGCGCAGAGCCAAAACCCGAAAGAACAAGGAAGAAATCGAGAACCAGAGAATGACCCACATTGCAGTGGAGCGCAATCGAAGAAAACAGATGAACGAGTACCTCTCTGTTCTTCGCTCTTTGATGCCTGACTCCTACGTCCAAAGGGGTGACCAAGCTTCTATAATTGGAGGGGCTATTAATTTTGTAAAGGAGCTCGAGCAGAGGCTGCAATTTCTTGGTACTCACAAAGAAACAGAGGGGAAAGCCAAATCAAACCCCTCTTTGCCCTTTTCGGAGTTCTTCACGTTTCCTCAGTACTCAACTACTAGCTGTAGTGGGAGCGATAGTGAGTCTAAGGCCGTGGGAGATGGAGTGGGAGAGGCAATACAGCGAGGTGTTGCAGATATAGAGGTGACAATGGTGGAGAGCCATGCAAATCTCCGAATCAGATCAAAGAAGCGACCAAAGCAGCTCTTGAAGATTGTGTCTGCCTTGCACACCATGCGTCTCACAATCTTGCACCTCAATGTCACCACCACTGCTCAAATCGTCCTCTATTCTCTCAGTGTTAAGGTAGAAGATGATTGCAAGCTGGGTTCAGTCGACGATATTGCCTCAGCTTTATTTCAAATGATGGAGACGATTCATCAGGAGGCAATGTTGAATTAA 948 0.4831 MEAVLYPQDPFSYGAKDLFNYTWASYQQDDHPSLDFLDSQTHSNYAYADWDCSTPSSMLPQLNEVPVSNPSSEANNNGSNSISETHNMDASASMPARPKRRRAKTRKNKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQRLQFLGTHKETEGKAKSNPSLPFSEFFTFPQYSTTSCSGSDSESKAVGDGVGEAIQRGVADIEVTMVESHANLRIRSKKRPKQLLKIVSALHTMRLTILHLNVTTTAQIVLYSLSVKVEDDCKLGSVDDIASALFQMMETIHQEAMLN 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1399 315 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 114 165 IPR011598 GO:0046983
Bisa03g1399 315 SMART finulus 120 171 IPR011598 GO:0046983
Bisa03g1399 315 MobiDBLite consensus disorder prediction 63 109 - -
Bisa03g1399 315 PANTHER MAX DIMERIZATION, MAD 52 312 - -
Bisa03g1399 315 Gene3D - 99 180 IPR036638 GO:0046983
Bisa03g1399 315 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 114 177 IPR036638 GO:0046983
Bisa03g1399 315 Pfam Helix-loop-helix DNA-binding domain 115 166 IPR011598 GO:0046983
Bisa03g1399 315 MobiDBLite consensus disorder prediction 63 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1399 Bisa-ChrBisa03 18862929 18864073 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1399 1 285 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 47.078 5.84e-72 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa03g1399 HLH 4.3e-10 No_clan