Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1396 ATGGAAGTTAATACCACTATGGTAGCTGCAGAATCACCTACTAATTCCACCGAGAACCACACATACATACAGCACCATCTGCATTCAGAAGAGCATATCCATCATCATCATCATCCCCATTTACCCTCTGAAACCATTCTCATAATCATCATAACCCTCACCTCCCTTACCCTCCTCCTTGCTGTTTCTCTCATCATCTTCGTCCTCCGTCGCCTTAAATCCTCCACCAACAACCCACCTTCCAAAGACAACACCCCAGTATTTAATGATACAAGTAGTAGATTCAATCTTGCTTCAACAACTTCCAACTACAGTGCTAGCCCCGATGTGAGGGGAGGGTGTATCTATGGAGGAAATATAAACAGAACAGCAGCACCAAGATTCAGGGGAGTTCAAGTTTTCACATATAAGGAGTTAGAAGTCGCCACAGAGGGATTCAGTGAAGCAAATATGATTGGGAACGAAGGATTTGGTTTGATGTACAGAGGAGTCCTCTGTGATGGGACTGTGGCTGCAGTTAAGTTGCTGCGAAGAGAAGGTAAGCATGGCGAGCGAGCCTTCAGAATAGAGGTGGATCTTTTAAGTCGATTGCATTCTCCATATTTGGTGGAGTTAATAGGGTATTGTGCAGACCAGCACCACAGGCTATTGATATTTGAGTATGTGGGGAATGGCACTCTGCGACACCATCTCCACTCTTCTCATGCTCACAATCAATCTCATCCCTTGGATTGGTGGACCCGCATGAGGATAGCCCTTGATTGCGCCAGAGCCCTAGAGTTCCTGCACGAGTATGCTGCCACGCCTGTGATACATCGAGACTTCAAGTCCAGCAATGTTGTACTGGATCACAACTTCCGTGCTAAGGTCTCTGACTTCGGATTGGCCAAGATGGGCTCACAAAAGATCAACGGTCAGGTTTCGACTAGGGTTTTGGGGACCACTGGATATCTTGCCCCAGAGTATGCATCAACGGGAAAGCTTACAACCAAGTCAGATGTGTACAGTTATGGTGTGGTACTGCTGGAGATACTAACAGGACGTGTACCTGTTGATATTAAACGGCCTGCTGGAGAGCATGTCCTGGTCTCTTGGGCTCTTCCAAGGTTAACTAACAGAGACAAGGTGGTGGAAATGGTTGACCCAGCTCTACGAGGACAGTATTCCAAGAAGGATCTAGTTCAGGTGGCAGCCATAGCAGCAATGTGCATACAGCCAGAAGCAGATTACAGGCCATTAATGACTGATGTAGTACAATCACTAATACCTCTAGTTAGAAGTCCGTCCTCCATTAGTTCGTCTAGTTCGAGTTCCCTCAGATTTCAAAAACCTGCATCGAGTCCAAGCCATATTAGTGCTGTTTCTGAATTCTGA 1374 0.4636 MEVNTTMVAAESPTNSTENHTYIQHHLHSEEHIHHHHHPHLPSETILIIIITLTSLTLLLAVSLIIFVLRRLKSSTNNPPSKDNTPVFNDTSSRFNLASTTSNYSASPDVRGGCIYGGNINRTAAPRFRGVQVFTYKELEVATEGFSEANMIGNEGFGLMYRGVLCDGTVAAVKLLRREGKHGERAFRIEVDLLSRLHSPYLVELIGYCADQHHRLLIFEYVGNGTLRHHLHSSHAHNQSHPLDWWTRMRIALDCARALEFLHEYAATPVIHRDFKSSNVVLDHNFRAKVSDFGLAKMGSQKINGQVSTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLEILTGRVPVDIKRPAGEHVLVSWALPRLTNRDKVVEMVDPALRGQYSKKDLVQVAAIAAMCIQPEADYRPLMTDVVQSLIPLVRSPSSISSSSSSSLRFQKPASSPSHISAVSEF 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1396 457 FunFam Serine/threonine-protein kinase PBS1 115 221 - -
Bisa03g1396 457 ProSitePatterns Serine/Threonine protein kinases active-site signature. 270 282 IPR008271 GO:0004672|GO:0006468
Bisa03g1396 457 Pfam Protein tyrosine and serine/threonine kinase 150 421 IPR001245 GO:0004672|GO:0006468
Bisa03g1396 457 FunFam Receptor-like serine/threonine-protein kinase ALE2 222 439 - -
Bisa03g1396 457 PANTHER OS01G0750732 PROTEIN 16 436 - -
Bisa03g1396 457 MobiDBLite consensus disorder prediction 427 457 - -
Bisa03g1396 457 Gene3D Phosphorylase Kinase; domain 1 119 221 - -
Bisa03g1396 457 Gene3D Transferase(Phosphotransferase) domain 1 223 440 - -
Bisa03g1396 457 ProSiteProfiles Protein kinase domain profile. 146 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g1396 457 SUPERFAMILY Protein kinase-like (PK-like) 128 421 IPR011009 -
Bisa03g1396 457 CDD STKc_IRAK 152 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1396 Bisa-ChrBisa03 18829712 18832962 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1396 111 456 Receptor kinase-like Gene Family AT3G58690 60.745 1.48e-151 435
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Bisa03g1396 PK_Tyr_Ser-Thr 2.6e-41 CL0016