Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1388 ATGGATCACCAAGGGCATAGCCAGAACCCACCTATGGGGGTTGTTGGTAGTGGAGCTCAATTGCCTTATGGTTCTAATCCATACCAGCCAAACCAAATGACCGAGGCACCCGGCTCGGTCGTTACATCTGTTGGGACCATTCAATCTACTGGTCAGCCTGCTGGAGCTCAGTTGGGACAACATCAACTTGCTTATCAGCATATTCATCAGCAACAGCAACAGCAACTTCAGCAACAGCTCCAAACCTTTTGGACAAATCAATACCAAGAGATCGAGAGGGTAACTGATTTCAAGAACCACAGCCTTCCCTTGGCAAGGATCAAGAAGATTATGAAAGCTGACGAGGATGTTAGGATGATATCAGCCGAGGCCCCTGTTATATTTGCAAGGGCATGTGAAATGTTCATATTAGAGTTAACCTTGCGTTCTTGGAACCACACTGAAGAAAACAAAAGGAGAACACTCCAAAAAAATGATATTGCAGCAGCAATCACAAGGACCGACATCTTTGACTTCTTGGTTGATATTGTGCCCCGGGAAGACTTGAAAGATGAAGTACTTGCATCAATCCCTAGAGGAACAATGCCAGTTGCAGGGCCTGCTGATGCACTTCCTTACTGCTATATGCCACCACAGCATGCTCAAGTTGGTCCTCCAGGTGTCATAATGGGTAAGCCCGTGATGGACCCGGCTCTATATGCTCAACCATCTCATCCGTACATGGCACAACAAATGTGGCCACAGCCACCAGAGCAACAACAATCGCCTCCAGATCATTAA 780 0.4692 MDHQGHSQNPPMGVVGSGAQLPYGSNPYQPNQMTEAPGSVVTSVGTIQSTGQPAGAQLGQHQLAYQHIHQQQQQQLQQQLQTFWTNQYQEIERVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLASIPRGTMPVAGPADALPYCYMPPQHAQVGPPGVIMGKPVMDPALYAQPSHPYMAQQMWPQPPEQQQSPPDH 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1388 259 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 62 202 - -
Bisa03g1388 259 Gene3D Histone, subunit A 63 179 IPR009072 GO:0046982
Bisa03g1388 259 FunFam Nuclear transcription factor Y subunit gamma 66 179 - -
Bisa03g1388 259 MobiDBLite consensus disorder prediction 1 28 - -
Bisa03g1388 259 SUPERFAMILY Histone-fold 68 173 IPR009072 GO:0046982
Bisa03g1388 259 Pfam Core histone H2A/H2B/H3/H4 62 164 IPR007125 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1388 Bisa-ChrBisa03 18767023 18767802 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1388 1 246 CCAAT-HAP5 Transcription Factor Family AT1G08970 63.158 2.11e-92 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Bisa03g1388 CBFD_NFYB_HMF 5.7e-18 CL0012