Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1366 ATGCTTCACGGAGAATCCGATAAACCCTTCAGAAGGTTAAAGCCAAAGTTTCAATTATACTACCTGATCTAAGCGGGAAGGGTGAAATGGTTCCGTGTTTCGGATAATTTGATTGGTATGGAGCTCGACATAGATGAAGGATTAATGGCTCCTACAAGGAATTCCAGAAGTGTGAATAAGCGGATTTCAAATTTAAATGAAGTCTCTCCTGGGAAAGATGGAGTCAACTCAAATAAAAATAAGCAACGGAAGAAAAAGTTGTCTGATAAATTGGGACCTCAGTGGAGCAAGGAGGAGCTAGAGCGATTTTATGAAGCATACAGGAAATATGGGAAAGATTGGAAGAAGGTGGCTGCTGTTGTACGTAACAGATCCACTGAAATGGTGGAGGCGCTTTACAGTATGAATCGGCCATTGGAACTTTCATGGGAAAAGTATATTGCAATTGCTCATAAGACCTTGTGTTTCCTATATGGAGGCTTTGAAGCTGCGCCATTATTTTCTCCATCTCAAACCCTAGACATGAAGCTAGTACCACTTATGCCTGAATCCAATGGGATGGCTTTGGATTACTTTTTCATGAGTGAAGCAATGGGTTATGATGAAGCTGAGAATGTGGGTGGTGGCGGAGGTAATATGGGTAATGAGATGAATGAAGTTGAGCCTAAGACACCGGAGAAGGTAGAGGAAAATGTGCAGGAGGAGATAGTTGAGGCTATGAAGGAGGCAAAGCATATTGAGCATTCTAAGACTATGCCTCTGGATTTTAGGAGAGCAACGAAGGTGGCTCCAAGTGTTAATTTGATGCAAATTCTTAATGTGCTGGACGATCATGTCCTGAAGGCTTCTGAGAATGCATACCTATCTTTGCCTGAGGGGACAGCTTCTGTTGTTGGCCTCATAGCAATGATGACAGATCACTATAATGTGCTGGAAGGGAGCGATAGTGAAAGGGAGAGCAATGATGCTTCTGAATCTCGAAGATCCATGAAACGAAAGCGTGGAAAAGTTCAGCTTAGCGCCCCAAAAGATTCTGCCCAGTCTCTGTTGATTTCTTCTAATGATGGTTGTCTCTCTTTGTTGAAGAGAAGACGCATTGATGGTAGCCAGCCTCGTGCAGTTGGGAAAAGGACACCTCGCATCCCTGTTTCTTATTCTTATAAGAAAGATGATAGGGGAAATTATGTTTCACCTAATAAAAGAAGCCTGAAGTCAGAGGTCAATGGTAATGATGATGAAGTTGCACATGTTGCAGCATTGGCATTGACTGAGGCTGCACAAAGAGGCGGTTCCCCCCAAGTCTCCAAAACACCGTACAGAAGAGCAGAGAAGTCCTCTCCTGTTCAGAGCTGGGAAAGAATGTCCGAGACATCTCGTGCCAAGTTTTGCGATGCTTCTATCTATGAAGAGTGCTTGGAAGGTAGTGTTGAAAGTAGAGGAGCTGAAAATGGAGAATATGCTAGAGACACTAGTTCCTTGATGGACATGGAAGGTGTCGGCACAGTTGAAATTCATCGGAAGGGGAAGAAGATTTACAGAAAGAGAGAAAGAGTAGAAAATGTTGGAAATCATCTGTTTGATGATGGTGGAGAAGCATGTAGTGGCACTGAAGAGGGAGTTAATATAAGTTCTTTGAGGGAAAAGTTTGATAATGAGGTTACTAATGCAAAACCTGAGCAATCCTCTCCTAAGGATCAGAGGAAAAGAAGCAAGAAACTTTACTTTGGAGATGAAAGTTCTGCCTTGGATGCTTTGCAAACTTTGGCTGATCTATCTTTGATGATGCCTGCATCTACAGTGGAATCTGAATCTTCTATCCAGTTGAAGGAAGAAAGAATTGTTGTTGATGAAGATGACAAGTCTGCCTTAGCTGAAGCTTCATTGACAAGCCAAAACAGAGACAAAATTAAACTCCCAGGTCCAAAACAAAAGCTTTTTCATGCAGCTACTGGAGTTGAGGTCTCAAACTCCAGAAAATCTGTGCTTGGAAGAGAATTGGCAAATGATACTAATACTCCTTCAGAATTGAAAGAACAGTTTCCGTCTTCAGATAGAACATTGAAAAGAAAGAGGAAGCCAATTGGTTCAAAGTCTATTGTTGATGAAGAGAACAAACCAGGGATTAAAGGAAGACACACTGGTCAGGTTTTCACTTCACCAAAACAGTTGAAGTCAGTCAGATCTTCTGAGAGTTCCTTGTGTAGTGATCAGAAAGATTTAACTGTATCAACAGCAGAAGTCCCACTTACAAGTGAAAAAGTTAGTTTACCAATGAAACAAAGAAGTAAACGCAAAAAGTGTCTGCAGAGAACATTCATGCCAAAAGAGAAGTCTTCTGAGAGCATATTGAACAATCAGCATAACAAATACTCTGCCCCCCTCCAAGACAGGACTTTTTATCTAAAAGAAAGGCTTTCTGGTTGCTTGTCATCTAATCTGGTTCGTAGATGGTGTACTTATGAATGGTTTTATAGCGCAATCGATTATCCATGGTTTGCCAAACGGGAGTTCATGGAGTACTTAAACCATGTTGGACTAGGGAATATCCCAAGGCTAACTCGTGTTGAGTGGAGTGTCATAAAAAGTTCCCTTGGCAAACCTCGCAGGTTTTCTGATCATTTTCTTTGTGAAGAAAGACAAAAACTTGAACAGTATCGGGAATCTGTGAGGAAGCATTATACTGAACTGCGGACAGGTATTAGAGATGGACTGCCAACAGATTTAGCCAGACCTTTATTTGTTGGAGAACGAGTAATTTCTCTACACCCAAAAGCAAAAGAGGTTCATGATGGGAGTGTGCTTACAGTTGACCATGACAAGTGCAGAATTCAGTTTGATCGTCCAGACTTGGGGGTTGAATTTGTGATGGATATTGATTGCATGCCTATGAATCCATCAGATAATATGCCAGAAGCTCTGAGGAGGCAGATTGGCGCAGGCAAAGTCTCTGGTATGAGTAAGGAGCTGCAGATGAATGGAAATTCAAATATATGTGCTTCAAGTGGACTGCTGGAGAAGGCACCCACTCCTTCTAGTACTTTGGTAAAGCAAGGAAAGGATGATGTTGACCATACCATCTCCCAATCAAAGGCTACTACCATTGACAACACCTGTGCACAAGCAGCATATGATCAGCCTTGTACAATGACACATCATCAAGCTAGGGAAGCTGATATACAGGCCCTTTATGACCTGACTTGTGCTCTCGATAAAAAGGAAACATTGCTAATGGAGCTTAGGAATGCAAATAATGAGATATTGGAAAACCAAAATGACATAGACTGCTTAAGAGATTCAGAGGCTTTCAGGAAGCATTACGCCACGGTCTCTTCTGCTTTGCTTCACTTGAGGCAACGCAATACCTACACTGGGAACTCTCTGCCATCATGGATGAAGGCCCAAGCAAGTTTCAATACTCATGAGGACCTTCCGAGTACATTGTATAATTCCCTAGCACAGGAGCTAGGGTCTACTGTTATTGAAATTATCAAAGGATCCAGGCTAAAAGCACACGCCATGGTGGCTGCAGCAGTTCAGGCGACGTTATCAGCAAAGGAAGGTGAAGATGCTTTCATGAAGATTGGACAGGCATTGGATTCCATTGATTATCAGCAGTTGGCCTCCTACTCTAGGTTATCTGTTGTCAGGTCCCACGAGCAAGGGAATAGCACTACTGGTCACAATAATGAATCTATTCACTGTGCATCAGAGGCTTTGCCTAGTGATACATCTTGTGCAAATTTGCCTAATGATTCCGAAAAAGTTGATGCCGAAATTCCATCAGAGCTCATCACCTCCTGTGTTGCTACATTGATCATGATACAGACCTGTACAGAACGACAATACCCTCCGGCTGATGTGGCTCAGATATTAGACTCTGCTGTTACTAGCCTGCATCCATGTTGTCCTCAAAACCTTCCTATTTACAGAGAAATTCAAATGTGCATGGGAAGAATAAAGACCCAGATTTTAGCTCTAATTCCAACGTGA 3990 0.4228 MLHGESDKPFRRLKPKFQLYYLIXAGRVKWFRVSDNLIGMELDIDEGLMAPTRNSRSVNKRISNLNEVSPGKDGVNSNKNKQRKKKLSDKLGPQWSKEELERFYEAYRKYGKDWKKVAAVVRNRSTEMVEALYSMNRPLELSWEKYIAIAHKTLCFLYGGFEAAPLFSPSQTLDMKLVPLMPESNGMALDYFFMSEAMGYDEAENVGGGGGNMGNEMNEVEPKTPEKVEENVQEEIVEAMKEAKHIEHSKTMPLDFRRATKVAPSVNLMQILNVLDDHVLKASENAYLSLPEGTASVVGLIAMMTDHYNVLEGSDSERESNDASESRRSMKRKRGKVQLSAPKDSAQSLLISSNDGCLSLLKRRRIDGSQPRAVGKRTPRIPVSYSYKKDDRGNYVSPNKRSLKSEVNGNDDEVAHVAALALTEAAQRGGSPQVSKTPYRRAEKSSPVQSWERMSETSRAKFCDASIYEECLEGSVESRGAENGEYARDTSSLMDMEGVGTVEIHRKGKKIYRKRERVENVGNHLFDDGGEACSGTEEGVNISSLREKFDNEVTNAKPEQSSPKDQRKRSKKLYFGDESSALDALQTLADLSLMMPASTVESESSIQLKEERIVVDEDDKSALAEASLTSQNRDKIKLPGPKQKLFHAATGVEVSNSRKSVLGRELANDTNTPSELKEQFPSSDRTLKRKRKPIGSKSIVDEENKPGIKGRHTGQVFTSPKQLKSVRSSESSLCSDQKDLTVSTAEVPLTSEKVSLPMKQRSKRKKCLQRTFMPKEKSSESILNNQHNKYSAPLQDRTFYLKERLSGCLSSNLVRRWCTYEWFYSAIDYPWFAKREFMEYLNHVGLGNIPRLTRVEWSVIKSSLGKPRRFSDHFLCEERQKLEQYRESVRKHYTELRTGIRDGLPTDLARPLFVGERVISLHPKAKEVHDGSVLTVDHDKCRIQFDRPDLGVEFVMDIDCMPMNPSDNMPEALRRQIGAGKVSGMSKELQMNGNSNICASSGLLEKAPTPSSTLVKQGKDDVDHTISQSKATTIDNTCAQAAYDQPCTMTHHQAREADIQALYDLTCALDKKETLLMELRNANNEILENQNDIDCLRDSEAFRKHYATVSSALLHLRQRNTYTGNSLPSWMKAQASFNTHEDLPSTLYNSLAQELGSTVIEIIKGSRLKAHAMVAAAVQATLSAKEGEDAFMKIGQALDSIDYQQLASYSRLSVVRSHEQGNSTTGHNNESIHCASEALPSDTSCANLPNDSEKVDAEIPSELITSCVATLIMIQTCTERQYPPADVAQILDSAVTSLHPCCPQNLPIYREIQMCMGRIKTQILALIPT 1329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1366 1329 MobiDBLite consensus disorder prediction 532 573 - -
Bisa03g1366 1329 Coils Coil 1065 1099 - -
Bisa03g1366 1329 MobiDBLite consensus disorder prediction 204 229 - -
Bisa03g1366 1329 CDD SANT 95 129 IPR001005 -
Bisa03g1366 1329 SMART sant 91 139 IPR001005 -
Bisa03g1366 1329 MobiDBLite consensus disorder prediction 384 406 - -
Bisa03g1366 1329 MobiDBLite consensus disorder prediction 312 329 - -
Bisa03g1366 1329 ProSiteProfiles SANT domain profile. 90 127 IPR017884 -
Bisa03g1366 1329 MobiDBLite consensus disorder prediction 686 715 - -
Bisa03g1366 1329 SUPERFAMILY Homeodomain-like 90 135 IPR009057 -
Bisa03g1366 1329 ProSiteProfiles Myb-like domain profile. 95 133 IPR001005 -
Bisa03g1366 1329 Pfam DIRP 822 922 IPR033471 -
Bisa03g1366 1329 MobiDBLite consensus disorder prediction 312 345 - -
Bisa03g1366 1329 Pfam Myb-like DNA-binding domain 94 129 IPR001005 -
Bisa03g1366 1329 MobiDBLite consensus disorder prediction 686 709 - -
Bisa03g1366 1329 Gene3D - 40 141 - -
Bisa03g1366 1329 SMART DIRP_2 823 924 IPR033471 -
Bisa03g1366 1329 PANTHER LIN-9 49 137 IPR010561 GO:0006351|GO:0017053
Bisa03g1366 1329 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 87 129 IPR017930 -
Bisa03g1366 1329 Coils Coil 229 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1366 Bisa-ChrBisa03 18372001 18386936 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bisa03g1366 DIRP 1.9e-30 No_clan