Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1362 ATGGAGGATGAGAGATTATTGCCGGTTGCAAATGTGGGTAGGATCATGAAGCAGATACTTCCTGCAAGAGCAAAGATCTCAAAGGAAGGGAAGCAAGTAATGCAAGAATGTGCAACGGAGTTCATAAGCTTTGTGACAGGCGAGGCATCTGACAAGTGTCACAAGGAGAATCGCAAGACTGTGAATGGGGATGACATCTGTTGGGCTCTCAATGCTTTAGGGTTTGACAATTATGCTGATGCCATTGCTAGGTACTTGTACAAGTACAGGCAAGCTGAAAGGGACAAGGCCAATCAACACTGCAATAATAAGGCTCATAAGCCCCAATCTCAAAGCAAGTTTAAATTTGAAGATTCTTTGGCCACAAAATCGAGCTCCAAAACTCAGGAGGAGGAAACTGATCATGAAGTTTGTGGTGTAAAAGAGTCTAGGTTTTCTGGTGAGAAGGCTCCTGCAAGTCATCTGTTACTTTCACTTTACAATATCCATTTTGTTGAAGAGGAGCTTTTCTACACTTGTATACTTGGGTTGAAGGCTAGCTATGCTAGCTTATTGAAGATATGGGAGGCACAGGAGGTTTCTTATAATGATTAA 594 0.4226 MEDERLLPVANVGRIMKQILPARAKISKEGKQVMQECATEFISFVTGEASDKCHKENRKTVNGDDICWALNALGFDNYADAIARYLYKYRQAERDKANQHCNNKAHKPQSQSKFKFEDSLATKSSSKTQEEETDHEVCGVKESRFSGEKAPASHLLLSLYNIHFVEEELFYTCILGLKASYASLLKIWEAQEVSYND 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1362 197 PRINTS CCAAT-binding transcription factor subunit A signature 53 71 - -
Bisa03g1362 197 PRINTS CCAAT-binding transcription factor subunit A signature 34 52 - -
Bisa03g1362 197 PRINTS CCAAT-binding transcription factor subunit A signature 72 90 - -
Bisa03g1362 197 ProSitePatterns NF-YB/HAP3 subunit signature. 37 53 IPR003956 GO:0005634|GO:0006355|GO:0043565
Bisa03g1362 197 MobiDBLite consensus disorder prediction 97 139 - -
Bisa03g1362 197 MobiDBLite consensus disorder prediction 103 123 - -
Bisa03g1362 197 MobiDBLite consensus disorder prediction 124 139 - -
Bisa03g1362 197 SUPERFAMILY Histone-fold 3 118 IPR009072 GO:0046982
Bisa03g1362 197 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 6 70 IPR003958 -
Bisa03g1362 197 Gene3D Histone, subunit A 1 138 IPR009072 GO:0046982
Bisa03g1362 197 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 2 128 IPR027113 GO:0001228|GO:0006355|GO:0016602
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1362 Bisa-ChrBisa03 18322045 18322867 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1362 1 113 CCAAT-HAP3 Transcription Factor Family AT1G09030 65.517 6.25e-53 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Bisa03g1362 CBFD_NFYB_HMF 7.4e-24 CL0012