Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1359 ATGGATCATGCACGGCCAACTTCGGGGAATGACGAGGACAATGTGGGGATTCCAGATGATTTGCGATGCAAGAGGTCAGATGGGAAACAGTGGAGATGCACTGCTATGCCCATGCCAGATAAAACAAAATCTAAGAGAAAGTCATTAGGTGAGAGTGATATTTATCTGGAGAGCAAGAGTGATGATTTTGATGTGCCACTCTCTAGTATGCAAGTTCGAGAACAGCACGCAACCCCTGAGAAAAAGTTATCGGATAAGGTGTCAAAAAATAGATATCGCTATACGCCAGAGTCGCAGGCCATAAAGAGTAGGCCTGTACGTAATGCTTCAAACACAGATAACGATTCACCAGATGATGTCCCACAAAAAATGTTCCCTTCTAGAGTTGAGAAGTACAATAGGATCCCTGAATATGATGGAATGCTCTGTGGCATTGTTATTGGGAAGATATTGGCTTTAATTGATGTTAAGATAACGCTAGAAAAGATCAGAGAGGATTGCATTGAAAAGATGAGGTCCTCTGCTAGGAATACTCTGATGGAAGTTCAGATTCCTCTGAAGACACTTGTGGGCAAACTTGCCATCAGTGTAAAAGGAATAACAGAGACAGAGTTATTTGGTGTCTCAAATGTGATCGAAGAGGGTACTGTGAAGGTTGAATCTCGACATGTATCTCCACTCACTGCTTTCATCATGCTTCCTGTCATAAAGCAGGTCTATCAGGAGCAGTGCTTTAAATTTGAAGTTGAAAAGAAGTTGCCAGGTGCTGAAATAGATCTTCCCAGGACAAAATTGAATGCTGATGAGCAGATGTGCTGGATTAGTGACTCTAGTGGTCCACCTAGTGATCTCAAACTGTGCCAATGTTCTCATAGGGAGGGCAGTGGTGATAATTATCTGTACTGCCCAACCTTTGAAGATCTCAAAATTGATGGGATTGCCAGTTATAGAAGATCTTCTAACTGTGGTGATAAGAATGATGTAGGACCCAAGATTTTTATGTCTTATGGGATCAGTGAGGAACTTGGTAAAGGTGATTCAGTGACCAATCTTCACTTCAATATGCGTGACATGGGTTCTGAGGTGAAAGAACCATATGGAGATTCTCAAACATGTTCAGGGGGGACGTCCCCTCGTTCATCACTTGGTAGTGAACGTAGTGGAGTGGATTTGGATACTGACGAGAAAAACTCAATTATGAATCAAGGGCTTGAAATTTATTCCAGTACTAAAGGGAATATGATCAATTCTGAACTTCCAACCATAGAAAATGAAGATATCTCTGAGAAAGCGCACACAGATGTTCATTGGGATGTTTTTTGTAGGCAAGATGTTCCGAAGCTGACTGAATATCTGAAGATGCATCCGAAGGAGTTTGGGAAGCAGATTGACAAAGGAAATGAACATGCAAGTTTAGATCTTAATCTTAATTTCCTCCCTCATATTTTGGTTTGGTTTGATGCAAGGCCTCTTTACGATAGAGTTATTTTTCTTGACAGACATCATAGAAGAATGCTGAAGGAGGAATTTGGAGTGAAGCCATGGTCGTTTAAACAAAATTTGGGGGAAGCTATATTTGTTCCTGCGGGGTACCCTTTTCAAGTAAGAAATGTTCAGTTGGGCCTTGATTTCTTGTCTCCGGAAGGCTTGGGAGAGGCTGTAAGACTGGAAGAGGAAGTCCGCTGTCTGCCAAATGAACATGAGGCCAATTTTCAAGCATTGGAGTTCAGGAAGAGAGATCACGTTGGGAAGATATCTCTTTATGCTGCAAGTTCAGCCATCAAAAAAGTTCAGAAACTTGTTCTTGACAGAAAACTCGGTGAGATTGGATATGGGGACCCCAATTTGACTGCAATGGTTTGGTGGTCAAGCGAAGGCAGGTCACTTGTGCTTGAACTCATTTGGTTGGGCCAAGTCTGA 1920 0.4208 MDHARPTSGNDEDNVGIPDDLRCKRSDGKQWRCTAMPMPDKTKSKRKSLGESDIYLESKSDDFDVPLSSMQVREQHATPEKKLSDKVSKNRYRYTPESQAIKSRPVRNASNTDNDSPDDVPQKMFPSRVEKYNRIPEYDGMLCGIVIGKILALIDVKITLEKIREDCIEKMRSSARNTLMEVQIPLKTLVGKLAISVKGITETELFGVSNVIEEGTVKVESRHVSPLTAFIMLPVIKQVYQEQCFKFEVEKKLPGAEIDLPRTKLNADEQMCWISDSSGPPSDLKLCQCSHREGSGDNYLYCPTFEDLKIDGIASYRRSSNCGDKNDVGPKIFMSYGISEELGKGDSVTNLHFNMRDMGSEVKEPYGDSQTCSGGTSPRSSLGSERSGVDLDTDEKNSIMNQGLEIYSSTKGNMINSELPTIENEDISEKAHTDVHWDVFCRQDVPKLTEYLKMHPKEFGKQIDKGNEHASLDLNLNFLPHILVWFDARPLYDRVIFLDRHHRRMLKEEFGVKPWSFKQNLGEAIFVPAGYPFQVRNVQLGLDFLSPEGLGEAVRLEEEVRCLPNEHEANFQALEFRKRDHVGKISLYAASSAIKKVQKLVLDRKLGEIGYGDPNLTAMVWWSSEGRSLVLELIWLGQV 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1359 639 MobiDBLite consensus disorder prediction 1 29 - -
Bisa03g1359 639 MobiDBLite consensus disorder prediction 75 92 - -
Bisa03g1359 639 Pfam WRC 18 41 IPR014977 -
Bisa03g1359 639 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 325 601 IPR045109 GO:0032454|GO:0033169
Bisa03g1359 639 SMART cupin_9 300 561 IPR003347 -
Bisa03g1359 639 ProSiteProfiles WRC domain profile. 17 63 IPR014977 -
Bisa03g1359 639 MobiDBLite consensus disorder prediction 1 53 - -
Bisa03g1359 639 ProSiteProfiles JmjC domain profile. 291 561 IPR003347 -
Bisa03g1359 639 MobiDBLite consensus disorder prediction 93 118 - -
Bisa03g1359 639 MobiDBLite consensus disorder prediction 39 53 - -
Bisa03g1359 639 Gene3D Cupin 316 570 - -
Bisa03g1359 639 MobiDBLite consensus disorder prediction 360 395 - -
Bisa03g1359 639 SUPERFAMILY Clavaminate synthase-like 436 575 - -
Bisa03g1359 639 MobiDBLite consensus disorder prediction 65 124 - -
Bisa03g1359 639 MobiDBLite consensus disorder prediction 366 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1359 Bisa-ChrBisa03 18262230 18268078 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Bisa03g1359 WRC 3.4e-07 No_clan