Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1323 ATGGCCATGAACTCGAAGCTATCAACTACCTTATACACCATCGCTTCCCTTTTCATCCTCCTCTCTTCTCCCTCTCTTGCAGCCTTCTCCTTCTCTCAAGACACCACATGCGACCTCACACCCCATCCTTCATTCTGCAGAACCACTCTCCCTCCTCTGTCTTCAGCATCCATCCATGACCACACACTTCTTCCTCCATCAATCCCTCTCATCAACAAAAACATTTCTCGGTTTAATCTCTTCTCACCTTACCCAACAGTCCACAATTCCAGTTTCCACGCTTCGTGCCCTTCAAGATTGCCACAACTTACGTGCCTTGATGGTTTCAGTGAGGTCACTCTTTACCCCACTATTACCAGTGGCTTACTGAGTCCTCTCTCTGATGGGACCAAACTTTATAGCATATCTCTCGCTCTCTTCAAACATGGCTGGATCACTAACGCCACTGACAACACCATGAACAGGAAGCTACTTCAGAAAAAGATTGAAACTTTGGAGGTGAGACAGAAGGTGGTGGTGAACCCAGATGGTTCAGGGGATTTCACCACCATCAATGAGGCAGTCATGGCTGCACCTAATAACACTGGCACTAACAATGGTTACCATGTGATTTATGTTGTCGCTGGGGTTTATAACGAGTACGTGTCTGTTGCTAAGAACAAGCAAAACTTGATAATTGTAGGCGACGGCATTAACCGGACTATCATCACCGGCAATCGCAGTTTGGTTGATGGCTGGACCATCTTCCAATCCGCAACATTTGAGGCCGCACAGAGCAAAAGGAGACTCGCCATTATTGTTGTGTCTAGCTTCTTACTGGTGGCCATGACCGTGGCGGTCACTGTAGGTGTGAGCATGAATCAAAACGAGGGATCAAGCCAACCAAAGGACAACAACAAGCACGTCTCTGACTCCATGAAAGCTGTCACTGCCATTTGTCGTCCCACTGATTACAAAGAAGACTGCGTCAACACCCTCAACGCCGAGGCTGGCGACAGTACCGACCCTAAAGATCTCATTAAGGTTGTCTTTAACGTTACCATTCGTTCTGTGGGAGAGAGCCTCGCGAAGACACGCCTGATACATGATGTGGAGAACGACCCCAGAACCAAGATGGCACTCGACACGTGTATGCAACTCATGGAACTCTCCATCGGGGAGTTCCAAAAGTCTGTTGACAACATGGGCTCATTTGAACTCTCCAACGTAAACAACATGCTCATGAACCTCAAGGTTTGGATCAGCGGGTCCATCACCTACCAACAGACTTGCTTGGACGGATTTGAGAACACCACCACAGATGCTAGCAAAAAGATGCAGGATTTATTGAAACTCACGATGGAGAGGAGCAGCAATTTGATTGCCATCATCAATGATTTCGCCGACAGTTTCGCTCAACTAAGTTTATCAACGTCCCCTTCACGACGACTCCTTCAGGGGGACTTACGTGTGCTGGGTCATGGGGACCTTGACCTTCCATTTTGGCTTCAACAAGATGGTTCCAGAAGACTTCTTTCCACCGGAAAGCTCAAGCCCGACGTGATTGTAGCCCAAGATGGGAGTGGAATGGTGACAACCATAACCGATGCCTTGAAGCGGGTGCCTGCTAAGAACGTGAAGCCATTCATCATCTACATTAAGGAGGGTGTTTACCAAGAGTATGTTCGTGTTTACAATAACATGACCCACGTTGTCATGATCGGTGATGGTGGCGACAAGACCCGAATCACTGGAAACAAAAACTTTATCGATGGTGTCAACACCTACAGAACCGCCACTGTTGCTGTTGAAGGAGCCTTTTTCACTGCAATAAAGATGGGATTTGAGAACTCAGCTGGTGCTATAAAGCATCAAGCTGTAGCACTGAGGGTGCAGAGTGACATGTCGGTGTTCTACAAATGCTCAATGGATGGGTACCAAGACACACTGTATGCACATACAATGCGCCAATTCTACAGGGACTGCACCATCTCGGGCACCATAGACTTTGTGTTTGGGGACGCGGTTTCCATATTCCAGAACTGTACATTCGTGGTGAGGAAGCCATTGGAGAACCAGCAGTGCATCGTAACAGCACAAGGCAGGAAGGAGAGACATCAGCCAACAGCAATAGTGATCCAGGGAGGGTCTATCGTGGCGGACCCGGAGTACTACCCTGTTAGGTTCCAGAACAAAGCGTACCTGGCTCGTCCCTGGAAGGTCTATTCCAGAACCTTGTTCATGGACACCTTCATCGACGACTTGATCCAACCCGACGGCTTCATGCCCTGGCTGGGCACCGTTGGTCTAGACACTTGTTACTACGCAGAGATCAACAACTACGGCCCGGGCTCAGACAAATCCAAGCGCGTCAAATGGCCTGGCGTCAAGAACATCACCTCCGAAATGGCTGAGAGATACACCCCTTTCAAGTTCTTGAAGGGAGATAAATGGATTAAGATCACTCGCATTCCTTACACCGCTGGAACTTGGCAATCCAAGCAATAA 2487 0.4853 MAMNSKLSTTLYTIASLFILLSSPSLAAFSFSQDTTCDLTPHPSFCRTTLPPLSSASIHDHTLLPPSIPLINKNISRFNLFSPYPTVHNSSFHASCPSRLPQLTCLDGFSEVTLYPTITSGLLSPLSDGTKLYSISLALFKHGWITNATDNTMNRKLLQKKIETLEVRQKVVVNPDGSGDFTTINEAVMAAPNNTGTNNGYHVIYVVAGVYNEYVSVAKNKQNLIIVGDGINRTIITGNRSLVDGWTIFQSATFEAAQSKRRLAIIVVSSFLLVAMTVAVTVGVSMNQNEGSSQPKDNNKHVSDSMKAVTAICRPTDYKEDCVNTLNAEAGDSTDPKDLIKVVFNVTIRSVGESLAKTRLIHDVENDPRTKMALDTCMQLMELSIGEFQKSVDNMGSFELSNVNNMLMNLKVWISGSITYQQTCLDGFENTTTDASKKMQDLLKLTMERSSNLIAIINDFADSFAQLSLSTSPSRRLLQGDLRVLGHGDLDLPFWLQQDGSRRLLSTGKLKPDVIVAQDGSGMVTTITDALKRVPAKNVKPFIIYIKEGVYQEYVRVYNNMTHVVMIGDGGDKTRITGNKNFIDGVNTYRTATVAVEGAFFTAIKMGFENSAGAIKHQAVALRVQSDMSVFYKCSMDGYQDTLYAHTMRQFYRDCTISGTIDFVFGDAVSIFQNCTFVVRKPLENQQCIVTAQGRKERHQPTAIVIQGGSIVADPEYYPVRFQNKAYLARPWKVYSRTLFMDTFIDDLIQPDGFMPWLGTVGLDTCYYAEINNYGPGSDKSKRVKWPGVKNITSEMAERYTPFKFLKGDKWIKITRIPYTAGTWQSKQ 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1323 828 ProSitePatterns Pectinesterase signature 2. 657 666 IPR033131 -
Bisa03g1323 828 SUPERFAMILY Pectin lyase-like 511 822 IPR011050 -
Bisa03g1323 828 FunFam Pectinesterase 305 461 - -
Bisa03g1323 828 SMART PMEI_2 304 456 IPR006501 GO:0004857
Bisa03g1323 828 PANTHER PECTINESTERASE 266 813 - -
Bisa03g1323 828 Pfam Pectinesterase 171 258 IPR000070 GO:0030599|GO:0042545
Bisa03g1323 828 Pfam Pectinesterase 513 809 IPR000070 GO:0030599|GO:0042545
Bisa03g1323 828 Pfam Plant invertase/pectin methylesterase inhibitor 308 445 IPR006501 GO:0004857
Bisa03g1323 828 SUPERFAMILY Pectin lyase-like 170 258 IPR011050 -
Bisa03g1323 828 FunFam Pectinesterase 507 823 - -
Bisa03g1323 828 NCBIfam pectinesterase inhibitor domain 303 458 IPR006501 GO:0004857
Bisa03g1323 828 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 34 142 IPR035513 -
Bisa03g1323 828 Gene3D Invertase/pectin methylesterase inhibitor family protein 304 460 IPR035513 -
Bisa03g1323 828 Gene3D - 507 823 IPR012334 -
Bisa03g1323 828 Gene3D - 164 303 IPR012334 -
Bisa03g1323 828 ProSitePatterns Pectinesterase signature 1. 538 557 IPR018040 -
Bisa03g1323 828 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 307 460 IPR035513 -
Bisa03g1323 828 CDD PMEI-like_3 311 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1323 Bisa-ChrBisa03 17722221 17728051 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1323 255 822 Carbohydrate Esterase AT3G05610 47.902 0.0 592