Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1315 ATGCAGTCCTGGCATATTCTCACTTGCCAGCATTTTAATTTGGATATTCCCTTTTGGGGGATTCCTCTGAAGTATATGCCGCGTGCTAATGCAATGTCATTTGACCAAGTTGCCCTCCTATTTCGTGTCCCCGATTTGGATCTTCGGGAAGGTATTGCGTCACTCGAGGGTAACTCTGGCATTCCGCCTCCTGCCACCAACTTGGAGAGAATGAAAGTTTTTGGTCTTTGCTCATTAAACTTTACTTAGCCACTGCTTGAACGGTCCGAGGCAATGTCAGAAGCATTGTCGACTTCGCAGTCGCTTAGGCAATGCGCCGAACCTAATTGGATATTTGAGGAATTGCCGAAGGCCACCATTGTTTCCGTTTCCCGACCAGACACCGGAGATATTGGCCCGATCCTTCTCTCTTACACCATTGAGTTGCAGTACAAACAGTTCAAGTGGCGCTTAGTGAAGAAAGCATCACAAGTTCTTTATTTACATTTCGCTTTGAGGAAACGTGCAATAATTGAAGAATTTCATGACAAGCAAGAGCAGGTAAAAGAATGGCTACAAAGCTTAGGGGTAGTAGATCAAACAGCAATGGTACAAGATGCTGAAGAACCTGATGATGGAGCTGTGCCTTTGCATCATGAAGACAGTATCAAGAACAGATATGTTCCATCTGCAGCTGCCTTACCAATCATTCGTCCATCACTAAGAGGGCAGCAATCAGTTGCAGATAAAGCAAACGTCGCAATGCAGGGTTACCTAAATCATTTTCTTGGAAATTTGGACCTTGTCAATTCTCGAGAGGTCTGCAGGTTCTTAGAGGTCTCCAAGTTATCCTTTTTACAGGAGTATGGACCAAAACTGAAAGAAGGCTATGTAATGGTGAAGCATCTATCAAATATCACAAGGGATTCAGATATGACATGCTTTCCATGCGAATGGTTTGGTTTTTGCAATAATAACTGGCGGAAGGTATGGGCTGTATTGAAACCTGGCTTTTTGGCCTTGCTGGATGATCCTTTCAATAACAAACCACTGGACATAATTGTTTTTGATGTCCTCCCATGGTCTAATGAAGATAAGGTATCCCCAGTATGTTTGGCTGATCATATAAAGGAAGGAAACCCATTAAGATATACATTTAAGGTTACTAGCGGAAATCGGAGCATAAGGTTGAGAACTAGCAGTGGCGTTAAAGTTAATGATTGGGTTACTAAAATTAACGAGGCTGGTTTTGGACCTTCAGAGGGTTGGTGTCACCCTCATCGTTTTGGTTCATTTGCTCCCATAAGAGGTTTGAATGAAGATGGGAGCCAAGCCCAATGGTTTATAGATGGGAAGGCAGCATTTGAAGCAATTGCTTCTTCAATTCAGGAAGCGAAGTCAGAGATCTTCATTACTGGATGGTGGCTTTGTCCAGAGCTCTATCTGAAACGTCCTTTTCACTCTCATTTTTCTTTTAGGCTGGACACATTACTAGAAGAAAAAGCCAAACAAGGAGTTCAGATCTATGTGCTTCTATACAAGGAAGTCTCTCTAGCTTTGAAAATTAGCAGCATGTACAGTAAGAGAAGACTCCGTAACATCCATGAGAATGTGAGGGTGTTGCGTTATCCCAACCATTTATCAACTGGTGTCTATTTATGGTCGCACCATGAAAAACTTGTTATCATTGATTACAAGATTTGCTATATTGGAGGATTAGATTTATGCTTTGGCCGTTATGACACAACTGAACATAAAGTTGGCGATCGCCCCTCTGAAATATGGCCTGGAAAGGACTATTACAACCCAAGAGAATCTGAACCTAATTCTTGGGAAGACACTATGAGAGATGAATTGGATCGTGAAAAGTATCCCCGCATGCCATGGCACGATGTCCACTGTGCTCTTTGGGGACCTCCCTGTCGTGACATTGCTCGTCACTTTGTTCAACGTTGGAACCATGCTAAGAGAGCCAAAGCTCCAAATGAACATACGATTCCACTACTTATGCCTCACCACCACATGGTCATCCCTCATTACTTGGGAAGAAGCAAAGAGATAGATATTGCTGGAAGGAAAGAAGACAACACCAAAGAAACCGACAGTCAAAATTCTTCTTCATCACAATCACCCCCACAAGATATACCACTGCTTCTACCTCAAGAAGCTGGTGGAGAACATCTTAAGTTAATTGGATATGATACGAATGACAATCTTATTGATCAAACAAATATTTCTGAAAGCCCAAGACCAAGCCATGAAACTTCAGAATCAGATGCTCAGATGAAGGGGCTTTTGGATGAATTTGCTCCTTCTAACTTGGAGACACAATATGCCGTTGATGCTACAGATGATTGGTGGGAAACACTTGAAGAAGATTGCCGTGATGCCAGTGCTATGGAATATGGAGAAGTTGGTCCACGAACTGCTTGTCGCTGTCAGGTGATCAGAAGTGTCAGTCAGTGGTCTGCTGGAACAAGTCGGACCGAAGAAAGTATTCACACTGCTTATTGTTCTCTTATTGAAAAGGCGAAGCATTTTATCTACATTGAGAACCAATTTTTCATATCAGGCCTGGCAACAGATGATATTATTCAGAACCGTGTATTGGAAGCATTGTACAGGCGTATTTTACTGGCTCACAAAGAGGAAAAACCTTTCAGAGTAATAATTGTGATGCCTCTCTTACCCGGCTTCCAGGGTGGTCTGGATGATGGTGGTGCAGCAACTGTGAGAGCCATTACACACTGGCAGTATCGAACTATCTCTAGAGAAAACCACTCCATATTAAACAACCTAAAAGCTTTACTTGGCCCTAAGACTAATGAGTACATTTCTTTCTATGGTCTACGATCTCATGGAAGGCTTTTTGATGGAGGCCCTATGGCCACGAGTCAGGTATATGTACACAGCAAATTGATGATAGTAGATGACCGTGCTGCTATAATTGGATCATCAAATATAAATGATAGGAGTTTGCTTGGTTCAAGAGACTCTGAGATTGGAGTGGTTATTGAAGACAGAGAGTATGTTGAATCATCTATTAATGGAGAGCCATGGAAGGCTGGGAAATTTTCCTATAGCCTCCGTTGCTCCCTGTGGTCTGAGCACCTCGGTCTGCATGCAGGAGAGGCTAGTAAAATCAGTGATCCGGTTGCGGACACAACCTACAAGGACCTATGGTCAGCAACTGCAAAAGAAAATACTAGGATATACCATGAGGTATTCGCTTGTATACCCAACGATCAGATACACTCCAGAGCTGCACTTCGGCAGCACATGGCTCACTGGAAGGAGAAACTTTGTCATACCACCATAGACTTGGGAATAGCCCCTGAACAAACAGAGGCAGCAGAGAGATTAAAGTCTGTAAAAGGACATCTTGTTTCGTTTCCTTTGGAGTTCATGAGTGAAGAAGATTTAAGACCAGTTTTAATTGAGAGTGAGTTCTATGTATCTCCTCAATGTACTGGCCAACAGCTTGCCATCAGAGTGAAAATGACTGCAATTAATAGGTATTGCTATGGGTCTATAGTTGGAAGAACAGCATCAGTGGTATTATTGCAGCAGGTACCAGAATGTGGGAAATTTGTGAGGATGGTGATAAATGCGATTGCGGATTGTCTAGCATTAGGGTAG 3618 0.4276 MQSWHILTCQHFNLDIPFWGIPLKYMPRANAMSFDQVALLFRVPDLDLREGIASLEGNSGIPPPATNLERMKVFGLCSLNFTXPLLERSEAMSEALSTSQSLRQCAEPNWIFEELPKATIVSVSRPDTGDIGPILLSYTIELQYKQFKWRLVKKASQVLYLHFALRKRAIIEEFHDKQEQVKEWLQSLGVVDQTAMVQDAEEPDDGAVPLHHEDSIKNRYVPSAAALPIIRPSLRGQQSVADKANVAMQGYLNHFLGNLDLVNSREVCRFLEVSKLSFLQEYGPKLKEGYVMVKHLSNITRDSDMTCFPCEWFGFCNNNWRKVWAVLKPGFLALLDDPFNNKPLDIIVFDVLPWSNEDKVSPVCLADHIKEGNPLRYTFKVTSGNRSIRLRTSSGVKVNDWVTKINEAGFGPSEGWCHPHRFGSFAPIRGLNEDGSQAQWFIDGKAAFEAIASSIQEAKSEIFITGWWLCPELYLKRPFHSHFSFRLDTLLEEKAKQGVQIYVLLYKEVSLALKISSMYSKRRLRNIHENVRVLRYPNHLSTGVYLWSHHEKLVIIDYKICYIGGLDLCFGRYDTTEHKVGDRPSEIWPGKDYYNPRESEPNSWEDTMRDELDREKYPRMPWHDVHCALWGPPCRDIARHFVQRWNHAKRAKAPNEHTIPLLMPHHHMVIPHYLGRSKEIDIAGRKEDNTKETDSQNSSSSQSPPQDIPLLLPQEAGGEHLKLIGYDTNDNLIDQTNISESPRPSHETSESDAQMKGLLDEFAPSNLETQYAVDATDDWWETLEEDCRDASAMEYGEVGPRTACRCQVIRSVSQWSAGTSRTEESIHTAYCSLIEKAKHFIYIENQFFISGLATDDIIQNRVLEALYRRILLAHKEEKPFRVIIVMPLLPGFQGGLDDGGAATVRAITHWQYRTISRENHSILNNLKALLGPKTNEYISFYGLRSHGRLFDGGPMATSQVYVHSKLMIVDDRAAIIGSSNINDRSLLGSRDSEIGVVIEDREYVESSINGEPWKAGKFSYSLRCSLWSEHLGLHAGEASKISDPVADTTYKDLWSATAKENTRIYHEVFACIPNDQIHSRAALRQHMAHWKEKLCHTTIDLGIAPEQTEAAERLKSVKGHLVSFPLEFMSEEDLRPVLIESEFYVSPQCTGQQLAIRVKMTAINRYCYGSIVGRTASVVLLQQVPECGKFVRMVINAIADCLALG 1205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1315 1205 CDD PLDc_vPLD1_2_yPLD_like_1 438 582 - -
Bisa03g1315 1205 MobiDBLite consensus disorder prediction 679 714 - -
Bisa03g1315 1205 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 545 572 IPR001736 GO:0003824
Bisa03g1315 1205 CDD PH_PLD 262 408 - -
Bisa03g1315 1205 SUPERFAMILY Phospholipase D/nuclease 797 1005 - -
Bisa03g1315 1205 ProSiteProfiles PH domain profile. 284 410 IPR001849 -
Bisa03g1315 1205 SMART PH_update 285 412 IPR001849 -
Bisa03g1315 1205 MobiDBLite consensus disorder prediction 694 708 - -
Bisa03g1315 1205 SUPERFAMILY PH domain-like 314 408 - -
Bisa03g1315 1205 CDD PLDc_vPLD1_2_yPLD_like_2 818 1002 - -
Bisa03g1315 1205 SUPERFAMILY Phospholipase D/nuclease 409 665 - -
Bisa03g1315 1205 Gene3D Endonuclease Chain A 780 1017 - -
Bisa03g1315 1205 Pfam PLD-like domain 831 1004 IPR025202 -
Bisa03g1315 1205 PANTHER PHOSPHOLIPASE D 241 1135 IPR015679 -
Bisa03g1315 1205 SMART pld_4 545 572 IPR001736 GO:0003824
Bisa03g1315 1205 SMART pld_4 958 985 IPR001736 GO:0003824
Bisa03g1315 1205 FunFam Phospholipase 792 1012 - -
Bisa03g1315 1205 MobiDBLite consensus disorder prediction 679 693 - -
Bisa03g1315 1205 PIRSF PLD_euk 746 1149 IPR016555 GO:0004630|GO:0006654|GO:0048017
Bisa03g1315 1205 PIRSF PLD_euk 84 703 IPR016555 GO:0004630|GO:0006654|GO:0048017
Bisa03g1315 1205 Gene3D Endonuclease Chain A 432 670 - -
Bisa03g1315 1205 Gene3D - 285 410 IPR011993 -
Bisa03g1315 1205 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 958 985 IPR001736 GO:0003824
Bisa03g1315 1205 Pfam Phospholipase D Active site motif 545 572 IPR001736 GO:0003824
Bisa03g1315 1205 MobiDBLite consensus disorder prediction 732 758 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1315 Bisa-ChrBisa03 17628213 17641960 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1315 111 1148 Phospholipase D Gene Family (Wang group) AT3G05630 67.328 0.0 1419