Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1301 ATGGGGACAGAACAGGTGTTGCCATTCTCGGTGGTATCTGTTGTGGAAGATGTTCTTCAACAGCAATGGACCCGATCCAGCGACAACAACTCGACCCCAAAGAGTGCTGAACCAGCTGACTTAAAAAGGTATGAAGCAGCAAAGTGGCTGCGAAAGACAATTGGAATTTTCGGAGGCAAAGAATTGCCTCATGAGCCTTCTGAAGAAGAGTTTAGGATTGCCTTGCGCAGTGGCATTATCCTCTGCAATGCTCTCAACAAAATTCGACCTGGAATCGTCCCCAAGGTAATTGAAGGTCCTGGCGATCCTGATGCTATTGATGGGGCAGGAGCACTCTCTGCGTTTCAATACTTTGAAAATGTGCGGAATTGTCTGGTAGCTTTGGAGGAAATGGGGCTTCCTACCTTTGAAGCTTCTGATTTGGAGGAGGGGGGGAAATCTGCGAGGTTAGTGAATTGTGTATTGGCGCTAAAGGCATACGGTGAATGGAAAGATGGAGGCAAACAGGGGTCATGGAAACAAAGTAGTGGGAGTTCAAAGCATCGACCATTTCTGCGCAGAAACTCTGAAGCATTCACCACTTTATCAAGAACCACAAGTGAGAAAGACATATGGACAAATTGCAACGATGGGGGTTCAATTCATAACCTGGCTCCACTAGTTCGGGAATATTTGTCAGATAAGAAGCCAGAAGAAATTCCCACTGTAGTCGAGGTCCTGCTTAGTAAAATCACGGAGGAGTTTGAACGTCGCTTGTTAATCCAACTCGAAATGTCGAAAACAAGTCCAGAACAGAAGCTAGCGTCATCTGAAACAGAGAATTCAGTTTCAAGAGTATATTCTGATGACGAAGTGGCAAAGATGGAAGAAAAGGAAGCTGTACGGTCTCAACAAGAAGAATGCCTGCCTCAAAAAACAGAAGAAGAAGAAGAATGTTATCAAGAAAATCACAGTGCGGATGGAAACTCGAGAATCCAGGTTTCGAACAAGCAGCGAAAGTTGGTCGCACGACAAAAGAAAGAAATCCAGCTTACCTTGATAGGTAAGCATGTGCAAAGCCTGGCTTCTGCTGCTTCAGGATATCAGAGAGTTCTAGAAGATAACCGCAAGTTATACAATCAACTACAGGACCTGAAAGGAAATATTAGAGTATACTGTCGAGTTAGACCCTTCTTTGGGAAAGTGAACAGTGCTGGCTCTGTTGGTAGCTTAGAGGAAGGAAGTATCTCACTGATAGTACCTTCCAAGTACGGAAAAGAAGGCAAGAAAACGTTTAATTTCAACAGGGTGTTTGGTCCTACTGCAACCCAAGCTGAGGTTTTCGCAGACATGCAGCCTCTTATTCGTTCTGTTCTTGATGGCTACAATGTCTGCATATTTGCTTATGGCCAGACAGGTTCAGGAAAAACTCATACTATGGCTGGACCAAACAATGTGACCGAGGAAACCATGGGAGTGAACTACAGGGCACTGCGTGATCTTTTCCAATTGTCAGAGCAGAGGAAGGACACCGTTGTCTATGATATCTCAGTTCAAATGCTTGAGATTTACAATGACCAAGTCAGAGATCTTCTAGCGACAGATGGGGGCACCAAAAGATATCCTTCTTTACATTTTTGA 1620 0.4444 MGTEQVLPFSVVSVVEDVLQQQWTRSSDNNSTPKSAEPADLKRYEAAKWLRKTIGIFGGKELPHEPSEEEFRIALRSGIILCNALNKIRPGIVPKVIEGPGDPDAIDGAGALSAFQYFENVRNCLVALEEMGLPTFEASDLEEGGKSARLVNCVLALKAYGEWKDGGKQGSWKQSSGSSKHRPFLRRNSEAFTTLSRTTSEKDIWTNCNDGGSIHNLAPLVREYLSDKKPEEIPTVVEVLLSKITEEFERRLLIQLEMSKTSPEQKLASSETENSVSRVYSDDEVAKMEEKEAVRSQQEECLPQKTEEEEECYQENHSADGNSRIQVSNKQRKLVARQKKEIQLTLIGKHVQSLASAASGYQRVLEDNRKLYNQLQDLKGNIRVYCRVRPFFGKVNSAGSVGSLEEGSISLIVPSKYGKEGKKTFNFNRVFGPTATQAEVFADMQPLIRSVLDGYNVCIFAYGQTGSGKTHTMAGPNNVTEETMGVNYRALRDLFQLSEQRKDTVVYDISVQMLEIYNDQVRDLLATDGGTKRYPSLHF 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1301 539 SUPERFAMILY Calponin-homology domain, CH-domain 44 176 IPR036872 -
Bisa03g1301 539 Gene3D - 36 162 IPR036872 -
Bisa03g1301 539 SMART kinesin_4 379 537 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bisa03g1301 539 SMART ch_5 42 160 IPR001715 GO:0005515
Bisa03g1301 539 ProSiteProfiles Calponin homology (CH) domain profile. 40 162 IPR001715 GO:0005515
Bisa03g1301 539 CDD CH_AtKIN14-like 42 159 - -
Bisa03g1301 539 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein with CH (Calponin Homology) domain 322 534 - -
Bisa03g1301 539 PANTHER KINESIN-LIKE PROTEIN KLP-3 47 533 IPR027640 GO:0003777|GO:0007018
Bisa03g1301 539 Coils Coil 361 381 - -
Bisa03g1301 539 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 347 533 IPR027417 -
Bisa03g1301 539 ProSiteProfiles Kinesin motor domain profile. 381 539 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bisa03g1301 539 Pfam Microtubule binding 367 525 IPR031852 GO:0008017
Bisa03g1301 539 Gene3D Kinesin motor domain 326 537 IPR036961 -
Bisa03g1301 539 Pfam Calponin homology (CH) domain 43 162 IPR001715 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1301 Bisa-ChrBisa03 17500057 17502883 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1301 369 525 Calmodulin-binding Proteins AT5G65930 38.217 1.87e-27 115