Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1296 ATGGTCGTGATGGATCTCAAGCAAAAGGAATCGTCGTCTGTGGAATTAACTGATAACAAGAAGTGCTGTACCGATTGCAAAACCACTAAGACCCCACTCTGGAGAGGAGGACCTGCTGGGCCCAAGACCCTGTGCAATGCTTGCGGGATAAGGTACAGGAAGAAAAGGGTGTCAACGGTGGGAATTAGCAAGGGGCAAGAGAGGAAGAGAGAGAGAGCACAGAGTCGGAGTGGTAAAGCCGTTGGTGAGAGTAAAAACAACGATTTAAAAGAATCACTGAAGATGAAGCTGATGGCCATAGGTGAGGAGGTTCTGTTGCAACGATCGCAGACAGAGTCAGTGGCGAAGAAGCAGAGGAAGCTAGGGGAGGTGGAACAAGCCGCCGTTTGCTTGATGGCCCTATCCTGCGGCTTCGTTTTCGCTTGA 426 0.5047 MVVMDLKQKESSSVELTDNKKCCTDCKTTKTPLWRGGPAGPKTLCNACGIRYRKKRVSTVGISKGQERKRERAQSRSGKAVGESKNNDLKESLKMKLMAIGEEVLLQRSQTESVAKKQRKLGEVEQAAVCLMALSCGFVFA 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1296 141 PANTHER OS01G0976800 PROTEIN 8 140 - -
Bisa03g1296 141 Gene3D - 18 87 IPR013088 GO:0006355|GO:0008270
Bisa03g1296 141 Pfam GATA zinc finger 23 57 IPR000679 GO:0006355|GO:0043565
Bisa03g1296 141 ProSitePatterns GATA-type zinc finger domain. 23 48 IPR000679 GO:0006355|GO:0043565
Bisa03g1296 141 MobiDBLite consensus disorder prediction 60 86 - -
Bisa03g1296 141 CDD ZnF_GATA 23 57 IPR000679 GO:0006355|GO:0043565
Bisa03g1296 141 SMART GATA_3 17 79 IPR000679 GO:0006355|GO:0043565
Bisa03g1296 141 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 20 57 - -
Bisa03g1296 141 ProSiteProfiles GATA-type zinc finger domain profile. 17 76 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1296 Bisa-ChrBisa03 17451869 17452921 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1296 16 141 C2C2-Gata Transcription Factor Family AT3G06740 50.394 7.40e-34 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Bisa03g1296 GATA 4.8e-18 CL0167