Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1294 ATGGCATCACGGATCAGGCAATCTCACCAAGACGATATTGACAAGGATGGTCAAGCTCCTGTGAGCGAGTCGAACAGGACAGAGATTCGCGCCATTCCTGAAATGATCAAAAGACAATGGATGGATGATTTGAGGCCCTACCTTGAACCATTACTTCGAAAAGTGGTCCGAGAGGAGACTCACTTTGCACTCCAGCGCCACCTAGGCCCACGACAAAACCTTAATCAGATAGCAATAAGTGGAGGAAGAGGCAGAGCTTTACAACTACATTTTAATAAGAAATTGCCTGGTGAGGTATTTACAGTCTCTAAGGTTGTGGCTGAGGACAAGACTTCAGTTCAAATTACTCTGTGTGATGCTGGATCTCAGCACTGTATAGTCAAAGATGGAGATCTGTCCTCCATAAAGATAGAGTTGTGTGTTTTAAATGGGGAGTTTGGTCCCACTAATGGCCGAGATGATTGGACTGCAGAGGAGTTCGATGATAACATATTACGTGAAAGAGAGAATAAAAGGCCTTTACTGATTGGGGATAGGTTCATAACACTTAAAAATGGAGTTGGCTATGTTACAAACATTCAATTCACAGATATCTCGAGATGGGCTAAGTCCGGAAAATTCAGGTTAGGGGCTAAAGTTGTTGAATCAACTCCTGATGGAGCAAATATTAGAGAGGGTATAAGTGAAGCTTTTAGGGTCAAAGATAGTCGTGGAGAGTCATACAAGAAACACAACATTCCGTCATTGAATGATGATGTTTGGCGTTTGAAAAAGATTGCAAAAGATGGGAAAAGACATAAACTGCTGCAGAAGCATAATATACTGACTGTCGGTGATCTGTTGCAGTTGCATAATACCAACCCACATCTATTAAAACAGAAAATTGGCAAAATTGGAAGTAAGTCATGGGAAGCGCTTATTGATCATGCTCAAGCTTGTGCTATGCAAGAAGATGGAAATAGTTACAATAACACAGCACTACTCCCAAATCCTGGTTACGACAATCTACAAGCTGGGCGAGGCCTGCTACAAGATCACTCCCTCACTGCTCACCGAGATTTGTGTGACCCATCTACCGCAACATCTACAATGCATATTGGTGAAGCAGTACCTTATGGACAAGCAGAGTTTGGAAAACTTGTACCAACCAGTTCTGGAGGGGGAGAATTTGTCCCCGTATTGTCAGACATTGATGATCACCTTTGGGCTTGTCTCTTTGCTTCTTCTGGTGATGGACTAGAATGTGGCTATCATTCTTCTTACCCCAATGCTGCTTTATATATGCCTACCGGTAACTCGAGGGCCGAGGTCCGTCGGAATCGATACAAGGTGGCCGTGAACGCTGAAGAAGGTCGCAGACGGCGAGAGGATACAATGGTCGAGATCCGCAAGAACCGTAGGGAAGAGAGTTTGCAGAAGAAGAGGCGCGAGGGTCTTCAAACTCAGCAGATGCCTGCTTCTATTCAGGCTTCTGTAGTAGAGAAGAAGTTGGAACACCTATCATCCATGGTTACAGGTGTTTGGACAGATGATAATAGTGTGCAGCTTGAGGCAACAAATCAATTTCGGAAGTTGCTCTCAGTTGAACGCTGCCCTCCAATTGAGGAGGTTATACAATCTGGTGTAGTTCCTCGCTTTGTTGAATTTTTGATGAGGGAAGACTTTCCGCAGCTGCAGTTCGAGGCAGCTTGGGCTTTGACTAATATAGCTTCTGGAACATCTGAAAACACCAAGGTAGTAATTGATCATGGGGCTGTCCCAATTTTTGTCAAACTCCTTGGTTCCCCAAGCGATGAAGTTCGTGAACAGGCAGTGTGGGCATTAGGAAATGTTGCTGGCGATTCTCCCAGCTGCCGTGATCTTGTTCTTAGTCATGGCGCCTTGCTTCCTTTGCTGGCTCAGTTGAATGAACATGCCAAGCTTTCTATGCTCAGAAATGCTACCTGGACACTTTCAAACTTCTGCAGGGGCAAGCCACAGCCTCCTTTTGATCAGGTCAAACCGGCACTTACTGCTCTTGCCCATGTTGTCCATTCAAATGATGAAGAAGTCTTGACCGATGCCTGTTGGGCACTTTCATACCTTTCTGATGGTACAAATGACAAAATTCAAGCTGTAATTGAAGCTGGTGTATGTGGTCGGCTTATTGAGCTTCTGCTGCACCAATCCCCTTCAGTGATCATCCCTGCTCTTCGAACAGTTGGAAATATAGTCACAGGAGATGATATGCAAACTCAGGTTGTGATAAATCTTCAAGTTCTTCGTTGCCTCTCGAATCTGTTGACCAATAATTATAAAAGAAGCATTAAGAAGGAAGCTTGTTGGACTCTATCGAACATCACAGCTGGGAATAAACAGCAGATTCAGGCTATAATTGAGGCTAATATAGTTGGCCCTCTGGTCCATCTGCTTCAAAATGCTGAGTTTGATATCAAGAAAGAGGCTGCTTGGGCTATCTCAAATGCCACATCTGGTGGATCTCATGAACAAATCAAGGACCTGGTAAGCCAAGGGTGTATTAAGCCCTTGTGTGACCTTCTTGTCGGCCCTGATCCTAGGATCGTGACAGTTTGTCTGGAAGGGCTTGAAAACATCTTGAAGGTGGGAGAAGCTGATAAAACTATGGGCAACACGGGTGGCGTGAATTTATATGCCCAAATGATTGATGATGCTGAGGGATTGGAGAAAATTGAGAACTTACAGAGTCATGACAACACAGAGATTTATGAAAAGGCAGTGAAGATTCTTGAAGCATACTGGTTGGAGGAAGAAGATGAGACTATGACTCCAGGGGATGCTTCCCAATCAGGGTTCAACTTTGGTAGCATTGAGGTTCCTGTTGTACCTTCTGGTGGATTCACCTTCAAGAGTTTTGGCTGTTCTGTCAGTAAAGTCATCCAGTATGATGGGACAACATTTGGGGGTCTAGTAAATGTCTTGGCAATTGTATTCTGCTTGGGTTTTACGAGAATGGAGTTAGCAAGTACCGGTACTTTTGGCAAATGCCAAATGCCAAATGCCAAATGCCACCGAATCTATATGTTCAGTCGGTGTTGA 3057 0.4432 MASRIRQSHQDDIDKDGQAPVSESNRTEIRAIPEMIKRQWMDDLRPYLEPLLRKVVREETHFALQRHLGPRQNLNQIAISGGRGRALQLHFNKKLPGEVFTVSKVVAEDKTSVQITLCDAGSQHCIVKDGDLSSIKIELCVLNGEFGPTNGRDDWTAEEFDDNILRERENKRPLLIGDRFITLKNGVGYVTNIQFTDISRWAKSGKFRLGAKVVESTPDGANIREGISEAFRVKDSRGESYKKHNIPSLNDDVWRLKKIAKDGKRHKLLQKHNILTVGDLLQLHNTNPHLLKQKIGKIGSKSWEALIDHAQACAMQEDGNSYNNTALLPNPGYDNLQAGRGLLQDHSLTAHRDLCDPSTATSTMHIGEAVPYGQAEFGKLVPTSSGGGEFVPVLSDIDDHLWACLFASSGDGLECGYHSSYPNAALYMPTGNSRAEVRRNRYKVAVNAEEGRRRREDTMVEIRKNRREESLQKKRREGLQTQQMPASIQASVVEKKLEHLSSMVTGVWTDDNSVQLEATNQFRKLLSVERCPPIEEVIQSGVVPRFVEFLMREDFPQLQFEAAWALTNIASGTSENTKVVIDHGAVPIFVKLLGSPSDEVREQAVWALGNVAGDSPSCRDLVLSHGALLPLLAQLNEHAKLSMLRNATWTLSNFCRGKPQPPFDQVKPALTALAHVVHSNDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCGRLIELLLHQSPSVIIPALRTVGNIVTGDDMQTQVVINLQVLRCLSNLLTNNYKRSIKKEACWTLSNITAGNKQQIQAIIEANIVGPLVHLLQNAEFDIKKEAAWAISNATSGGSHEQIKDLVSQGCIKPLCDLLVGPDPRIVTVCLEGLENILKVGEADKTMGNTGGVNLYAQMIDDAEGLEKIENLQSHDNTEIYEKAVKILEAYWLEEEDETMTPGDASQSGFNFGSIEVPVVPSGGFTFKSFGCSVSKVIQYDGTTFGGLVNVLAIVFCLGFTRMELASTGTFGKCQMPNAKCHRIYMFSRC 1018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1294 1018 ProSiteProfiles IBB domain profile. 422 484 IPR002652 GO:0006606|GO:0061608
Bisa03g1294 1018 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 584 626 IPR000225 GO:0005515
Bisa03g1294 1018 PANTHER IMPORTIN ALPHA 438 926 - -
Bisa03g1294 1018 FunFam Importin subunit alpha 437 476 - -
Bisa03g1294 1018 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 541 584 IPR000225 GO:0005515
Bisa03g1294 1018 Pfam Atypical Arm repeat 882 929 IPR032413 -
Bisa03g1294 1018 Pfam Calmodulin binding protein-like N-terminal domain 87 235 IPR046831 -
Bisa03g1294 1018 Pfam Importin beta binding domain 438 519 IPR002652 GO:0006606|GO:0061608
Bisa03g1294 1018 MobiDBLite consensus disorder prediction 1 21 - -
Bisa03g1294 1018 Gene3D - 498 921 IPR011989 -
Bisa03g1294 1018 Gene3D - 437 476 IPR036975 GO:0006606
Bisa03g1294 1018 FunFam Importin subunit alpha 498 921 - -
Bisa03g1294 1018 Pfam Calmodulin binding protein central domain 248 313 IPR046830 -
Bisa03g1294 1018 MobiDBLite consensus disorder prediction 1 28 - -
Bisa03g1294 1018 SMART arm_5 615 656 IPR000225 GO:0005515
Bisa03g1294 1018 SMART arm_5 699 739 IPR000225 GO:0005515
Bisa03g1294 1018 SMART arm_5 827 867 IPR000225 GO:0005515
Bisa03g1294 1018 SMART arm_5 784 824 IPR000225 GO:0005515
Bisa03g1294 1018 SMART arm_5 530 571 IPR000225 GO:0005515
Bisa03g1294 1018 SMART arm_5 573 613 IPR000225 GO:0005515
Bisa03g1294 1018 SMART arm_5 658 697 IPR000225 GO:0005515
Bisa03g1294 1018 SMART arm_5 741 782 IPR000225 GO:0005515
Bisa03g1294 1018 Pfam Armadillo/beta-catenin-like repeat 669 696 IPR000225 GO:0005515
Bisa03g1294 1018 Pfam Armadillo/beta-catenin-like repeat 784 823 IPR000225 GO:0005515
Bisa03g1294 1018 Pfam Armadillo/beta-catenin-like repeat 532 571 IPR000225 GO:0005515
Bisa03g1294 1018 Pfam Armadillo/beta-catenin-like repeat 742 782 IPR000225 GO:0005515
Bisa03g1294 1018 Pfam Armadillo/beta-catenin-like repeat 700 738 IPR000225 GO:0005515
Bisa03g1294 1018 Pfam Armadillo/beta-catenin-like repeat 828 865 IPR000225 GO:0005515
Bisa03g1294 1018 Pfam Armadillo/beta-catenin-like repeat 615 656 IPR000225 GO:0005515
Bisa03g1294 1018 Pfam Armadillo/beta-catenin-like repeat 573 612 IPR000225 GO:0005515
Bisa03g1294 1018 SUPERFAMILY ARM repeat 438 925 IPR016024 -
Bisa03g1294 1018 MobiDBLite consensus disorder prediction 466 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1294 Bisa-ChrBisa03 17423717 17438380 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1294 22 322 Calmodulin-binding Proteins AT5G62570 40.789 1.15e-61 213