Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1286 ATGGTCTTGCCTTCTTCCGATCCTCTGTTTGGCCTGTATATTTCCCTTGTTTCAATCAATTTAATACTACTTTCAGACATTACTGAAATTGGGTCAAGATTCAGGGTATCAATGGCTCAGGCCAGCAACAATGTCGTTGGGGTTGACAACACGTTCAGAAGAAAATTTGATCGAGAGGAGTATTTGGAACGAGCTCGGGAACGTGAGAGGCAGGAGGCGGAGGCACGGTCTAAACCGAAATCTAAAGGTCCTGCTGTGCAGAGGAAACCCTTGAAACATAGAGACTTTGAAGTAGACCTCGAATCCCGATTGGGGAAGAGTCAGGTTGTTACTCCAGTTGCACCACTAAGCCAGCAGGCTGGATACTACTGCTCAGTTTGCGAGTGTGTGGTAAAGGATTCTGCAAACTACTTGGATCATATTAATGGAAAAAAACATCAAAGAGCTTTGGGCATGTCTATGCGAGTAGAGCGTGCTTCCCTTAAACAGGTTCAGGAACGATTTGAAGTTCTTAAGAAACGTAAAGCTCCTGGCAGCTTCACAGAGCAAGATTTTGATGAGCGGATTTTAAAACAGCAACAAGAAGAGGAGGAAAGAAAGCGACAGCGTCGAGAAAGGAAAAAAGAAAAGAAGAAGGAGAAGGCTGCTGAAGAAGAGCCTGAAACAGATCCTGATGTTGCAGCTATGATGGGGTTTGGCGGATTCCGGTCATCCAAGAAATGA 723 0.4495 MVLPSSDPLFGLYISLVSINLILLSDITEIGSRFRVSMAQASNNVVGVDNTFRRKFDREEYLERARERERQEAEARSKPKSKGPAVQRKPLKHRDFEVDLESRLGKSQVVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLKQVQERFEVLKKRKAPGSFTEQDFDERILKQQQEEEERKRQRRERKKEKKKEKAAEEEPETDPDVAAMMGFGGFRSSKK 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1286 240 Coils Coil 187 219 - -
Bisa03g1286 240 MobiDBLite consensus disorder prediction 66 89 - -
Bisa03g1286 240 Gene3D Classic Zinc Finger 117 154 - -
Bisa03g1286 240 FunFam zinc finger matrin-type protein 2-like 116 154 - -
Bisa03g1286 240 MobiDBLite consensus disorder prediction 182 203 - -
Bisa03g1286 240 SMART ZnF_U1_5 119 153 IPR003604 GO:0003676|GO:0008270
Bisa03g1286 240 MobiDBLite consensus disorder prediction 182 240 - -
Bisa03g1286 240 SUPERFAMILY beta-beta-alpha zinc fingers 118 160 IPR036236 -
Bisa03g1286 240 MobiDBLite consensus disorder prediction 66 81 - -
Bisa03g1286 240 Pfam Zinc-finger of C2H2 type 122 146 - -
Bisa03g1286 240 PANTHER ZINC FINGER MATRIN-TYPE PROTEIN 2 42 240 IPR040107 GO:0000398|GO:0005681
Bisa03g1286 240 Coils Coil 58 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1286 Bisa-ChrBisa03 17296371 17301444 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1286 41 184 C2H2 Transcription Factor Family AT3G05760 81.250 5.80e-85 248