Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1259 ATGACGCCGAAACCAAAGTCCACTTCAAATTCAAACCCATACTTCAAACCCGGCTCTGCTGTCGAGGTCAGCTCCGACGATGAAGGGTTTCGCGGCTCTTGGTTTGTGGGCACCGTTATTCGCCGCTGTACTTCCAAGAAAAATCAGAACAAATTCTTGGTGGAGTATAAAACCATCATGGCCGATGAGAAGGGTACCAAACCCTTGAGAGAGATGCTGGATCTTCACCAGCTTCGGCCCCTCGCCCCAAGAGAGACTGACCGCGAATTCAAGTTCGGCGAAGAAGTCGATGCGTACCACAATGATGGCTGGTGGGAAGGCTCCATTACTGAAGAATTGGAAAACGGGAGGTTCGCGGTGTATTTCAGGGCCTCAAAGGAGCAGATTGAGTTTGGGAAGGAGGATCTCAGGCTTCATCGCGAGTGGGTCAATGAGAAATGGGTCCCCCCATTGGAAGAACCATCGGAAGAACAGAAAATTTTGTCAAATTTAGTGAAGTCTAGTGAAACAGTGACGGACAAAGTGAAGTCTTGTGAAATAGTAATAGACAAAGTGAAGTCTAGTGAAACAGTGACGGACAAAGTGAAGTCTAGTGAAACAGTGACGGACATGTTTAGCAAGGGGACACTAGTTGAGGTTAGCAGTGATGAAGATGGCTTCGAAGGAGCTTGGTTTGCAGCCACTGTTGTTGAACGAAAGGGAAAGGATAAGTTTCTTGCTGAGTACCTGCACCTACGCACTGATGATGATTCAGCGTTTTTGAGAGAGGAAGTTGATATCTTACATATTCGGCCTTATCCACCAGGACATGTTTGTGATTGCTTTAATCGTCTTCAGGAAGTTGATGCTTTGTACAACGATGGATGGTGGGTTGGAGTGATTTCCAAAGTTCTTAGCAACTCAAGGTATGTTGTATACTTCAGGAACAGCAATGAGGAACTGGAGTTTGAACACTCGGACTTAAGGATACATCAGGACTGGATCAATGGCAAATGGGTTATTGCTTCTAAGGCATTGAAGTTGTGA 1026 0.46 MTPKPKSTSNSNPYFKPGSAVEVSSDDEGFRGSWFVGTVIRRCTSKKNQNKFLVEYKTIMADEKGTKPLREMLDLHQLRPLAPRETDREFKFGEEVDAYHNDGWWEGSITEELENGRFAVYFRASKEQIEFGKEDLRLHREWVNEKWVPPLEEPSEEQKILSNLVKSSETVTDKVKSCEIVIDKVKSSETVTDKVKSSETVTDMFSKGTLVEVSSDEDGFEGAWFAATVVERKGKDKFLAEYLHLRTDDDSAFLREEVDILHIRPYPPGHVCDCFNRLQEVDALYNDGWWVGVISKVLSNSRYVVYFRNSNEELEFEHSDLRIHQDWINGKWVIASKALKL 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1259 341 CDD Tudor_Agenet_AtDUF_rpt1_3 15 83 - -
Bisa03g1259 341 MobiDBLite consensus disorder prediction 1 29 - -
Bisa03g1259 341 CDD Tudor_Agenet_AtDUF_rpt1_3 205 268 - -
Bisa03g1259 341 MobiDBLite consensus disorder prediction 1 18 - -
Bisa03g1259 341 Pfam Agenet domain 18 83 IPR008395 -
Bisa03g1259 341 Pfam Agenet domain 208 268 IPR008395 -
Bisa03g1259 341 Pfam Agenet domain 93 151 IPR008395 -
Bisa03g1259 341 Gene3D - 194 274 - -
Bisa03g1259 341 SMART agenet_At_2 203 271 IPR014002 -
Bisa03g1259 341 SMART agenet_At_2 273 329 IPR014002 -
Bisa03g1259 341 SMART agenet_At_2 88 144 IPR014002 -
Bisa03g1259 341 SMART agenet_At_2 13 86 IPR014002 -
Bisa03g1259 341 CDD Tudor_Agenet_AtDUF_rpt2_4 93 138 - -
Bisa03g1259 341 CDD Tudor_Agenet_AtDUF_rpt2_4 278 323 - -
Bisa03g1259 341 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 13 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1259 Bisa-ChrBisa03 16964808 16967706 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1259 215 327 PHD Transcription Factor Family AT5G58610 29.851 1.14e-07 51.6