Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1238 ATGCCACTCGGGAAATATTACTGCGACTACTGCGACAAGCACATTCAAGACACCCCCACTGCTCGTAAACGACACCTTCAAGGCATTCAGCATCTCCGTGCCAAAGCCTTTTGGTACGATTCAATCAAATTTCAAGATCCTAATCAGCTTTATCCAGACGGATTAGTCAAAGGGATTTGCAATCGCTTCGTCAAAAGGGGTTTTTGCCAATATGGCGATTCTTGCAAATATGTGCATCCAAAAATCCTGCCCAATGCCAACCATCAAGGAGTAGTACTTGATTCAGCAGCAATAGCCCCGGGGACTCATTTGGTTGGTGGAAGCTCTGCACCAGGAGATGTGGTACAAGATGCTATGGGAATGTCATGGGGCAATTTACCTCCATCTCTGAAGCCTCCTCCAGAAGGTGGATATCCTCCCCTTCCCTTCGTGGATTGGGGATAA 444 0.473 MPLGKYYCDYCDKHIQDTPTARKRHLQGIQHLRAKAFWYDSIKFQDPNQLYPDGLVKGICNRFVKRGFCQYGDSCKYVHPKILPNANHQGVVLDSAAIAPGTHLVGGSSAPGDVVQDAMGMSWGNLPPSLKPPPEGGYPPLPFVDWG 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1238 147 Gene3D Classic Zinc Finger 3 54 - -
Bisa03g1238 147 MobiDBLite consensus disorder prediction 125 147 - -
Bisa03g1238 147 SUPERFAMILY beta-beta-alpha zinc fingers 4 43 IPR036236 -
Bisa03g1238 147 PANTHER NUCLEASE-RELATED 1 147 - -
Bisa03g1238 147 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 59 81 IPR000571 GO:0046872
Bisa03g1238 147 FunFam U1 zinc finger family protein 3 57 - -
Bisa03g1238 147 SUPERFAMILY CCCH zinc finger 59 80 IPR036855 GO:0046872
Bisa03g1238 147 Pfam U1 zinc finger 5 37 IPR013085 GO:0008270
Bisa03g1238 147 SMART c3hfinal6 55 81 IPR000571 GO:0046872
Bisa03g1238 147 Gene3D - 55 107 - -
Bisa03g1238 147 ProSiteProfiles Zinc finger C3H1-type profile. 59 82 IPR000571 GO:0046872
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Bisa03g1238 zf-U1 3e-12 CL0361