Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1235 ATGGGGACTGAAAATCCTGGACGTCCAAGTTTCCGTGGAAGACCTGCCCCGACACCTTTTGCTGTTCCACAGACTATGACACCTTTTTCATCAACTGGTCCTGTGGTTAGCTCGGAGCCTCCTCCTCTCCGACCTGCTCCTCCTGCTGCTTCCCAGACCTCAGTACCATTTTCATCATCTGGACCTACAGTCAGACCAGGGGCGTCCAGTTTTACACCTATGCTCCCGGGCAGGTTTACTGATCCATCTGTGCCTCCACCCCCAGCATACAATGTGCCACCTGCTGGTGGACCGTTCCAGCGTCTTCCAACACCACAATTTACCCCAACAGCTCAAGCACCTCCACATGTTCCACCCATGGGACAACCATCAATTCAACCTTCTGCAAATCAAGCACCATCATTTCCTGCATCTCTTCAACCTCAGAGACCTTTTGTTCCTATGGGACCTCCCCCACCAAGTGCTGCTCCTATCCCTCAGAAGTCAAATGTTCCTCCTCCGTCAGATTCATCATTTGCAGGGCCGAGGTCTAATTTTCAGTCATCTTTTCCTGGATATGTACATAAGCAGACTGGTGCAGAAATGCAAGGTCCAGCTATGCATTCATCTTTTCCTACGAATCAAGTAAATTATGCACCTTCCCCACCTGCTCCATCCCATCAAGGAAGCTATGTTCCACCACCTCCAGTGGCTGCTCCTCTTGGCATGCAGCAATTGCAACAGCCAGGATATGGACCTTCTGTTGGTGCCATTCAGGGCCTGACAGAGGATTTCAGTTCGCTCTCTATTCAAACTCGTCCTGGAACAATGGATCAAGTATTTGATGCTAAAGAACTGCCAAGGCCCCTGGAAGGTGATGTAGAGCCAAGGTCTTTGTCTGAGATGTATCCAATGAACTGCAATCCCAGATATCTACGACTCACAACCGGTGGAATTCCCAGCTCCCAGTCTTTAGCTTCAAGATGGCGTCTACCTCTTGGAGCAGTTGTATGCCCACTTGCAGAAGCTCCTGATGGGGAAGAGGTGCCTATAATCAATTTTGCGCCAACGAGTGTTATACGCTGTAGGAGATGTCGCACATATGTGAATCCATATGTGACATTCACAGATGCTGGAAGAAAATTCCGGTGCAATGTCTGCACTTTGCTTAATGATGTTCCTAGTGAATATTTTGCCCAATTAGATGCCACTGGAAGAAGAGTTGATTTGGATCAAAGACCTGAGCTTACAAAGGGTACTGTGGAATTTGTTGCCCCTGCTGAGTACATGGTGCGACCTCCTATGCCTCCAGTATATTTCTTCCTCATTGATGTTTCCATATCTGCAGTTAGAAGTGGAATGATTGAGGTTGTGGCCCAAACAATCAAGTCATGTTTAGATGAGTTGCCTGGCTTTCCTAGAACACAAATAGGTTTTGCAACATTTGACAGCACAATTCATTTTTATAATATGAAGGCGTCCTTGACTCAGCCACAGATGTTGGTTGTCTCAGATCTGGATGACATATTTGTTCCTCTACCGGATGATCTCCTTGTTAATTTATCTGAATCCAGAAGTGTTGTGGAAACCTTCCTAGATAGTTTGCCAACCATGTTCCAGGACAATGTGAATATTGAATCAGCTTTTGGTCCGGCTCTGAAGGCTGCATTTATGGTTATGAATCAACTTGGAGGGAAATTGTTAATTTTTCAAAGTACACTGCCATCTCTTGGTGTTGGACGTTTGAAATTACGTGGAGATGACGTTCGTGTTTATGGGACAGATAAAGAACACATGTTAAGGTTGCCAGAAGATCCATTTTACAAGCAAATGGCTGCTGAGTTTTCTAAATACCAGATCTCTGCAAACGTGTATGCATTCAGTGACAAGTACACTGACATAGCCTCCTTAGGAACTCTGGCAAAGTATACTGGTGGTCAAGTGTATTATTATCCAGGTTTTCAATCAACTATTCATGGGGTGAAATTGAGGCATGAGTTAAGGAGAGACCTTACCAGAGAAACTGCCTGGGAAGCTGTCTTGCGCATTAGATGTGGAAAAGGTGTTCGCTTCACAACTTTTCACGGGAACTTTATGCTAAGGTCAACTGATCTGTTAGCACTTCCAGCTGTAGATTGTGATAAAGCATTTGCCATGCAGTTATCTCTTGAAGAGACATTGTTGACAAGTCAGACCATGTTTTTCCAAGTTGCGTTGCTATATACTGCATCTTGTGGGGAAAGGCGAATCAGAGTACACACAGCTGCAGCTCCTGTAGTTACAGACTTGGGGGAGATGTATCGCCTGGCTGATACTGGTGCCACTGCTTCTCTGCTTAGTAGGCTAGTACTTGAGAAAACATTGTCTAGTAAACTGGAAGATGCAAGGAGCGCTGTACAACTAAGAATTGTCAAAGCCTTAAGAGAATATCGCAATCTCTATGCTGTGCAACATCGCTTGGCCAACAGGATGATATATCCTGAGTCTCTTAAATTCCTACCCTTGTATGGATTAGCCCTTTGTAAATCAACACCTCTCCGTGGAGGATATGCCGATGCTCCACTGGATGAGCGGTGTGCAGTAGGATACACAATGATGGCTCTACCAATAAAAGGACTTTTGAAACTTCTCTATCCAAGCTTGATTCGATTTGATGAATATCTTTTAAAGGCATCTGCAGAGTCTGATGATTCACAAATCATTAAGAAAAGGTTACCTTTGACTGGGGAGAGCTTGGATTCTAGAGGCCTCTATGTATTCGATGATGGCTTCCGGTTCATTATATGGTTTGGTAGAGTGCTTTCACCTGATATAGCTATGAATTTGCTTGGGGCAGACTTGGCCGCAGAATTGTCAAAGGTTACTCTTAATAAGCATGACAATGAGATGTCAAGGAAGCTGATTAGGCTACTTGAGAAATTAAGAAATACTGATTGTTCATATTATCAATCGTGTCATCTTGTGAGGCAAGGTGAACAGCCCAGAGAAGGATTCCTTATTCTTGCAAACCTTGTAGAGGACCAGATGGGTGGTAACACTGGGTATGCTGATTGGATGCTACAATTATCCCGACAAGTGCAGCAATAA 3066 0.4472 MGTENPGRPSFRGRPAPTPFAVPQTMTPFSSTGPVVSSEPPPLRPAPPAASQTSVPFSSSGPTVRPGASSFTPMLPGRFTDPSVPPPPAYNVPPAGGPFQRLPTPQFTPTAQAPPHVPPMGQPSIQPSANQAPSFPASLQPQRPFVPMGPPPPSAAPIPQKSNVPPPSDSSFAGPRSNFQSSFPGYVHKQTGAEMQGPAMHSSFPTNQVNYAPSPPAPSHQGSYVPPPPVAAPLGMQQLQQPGYGPSVGAIQGLTEDFSSLSIQTRPGTMDQVFDAKELPRPLEGDVEPRSLSEMYPMNCNPRYLRLTTGGIPSSQSLASRWRLPLGAVVCPLAEAPDGEEVPIINFAPTSVIRCRRCRTYVNPYVTFTDAGRKFRCNVCTLLNDVPSEYFAQLDATGRRVDLDQRPELTKGTVEFVAPAEYMVRPPMPPVYFFLIDVSISAVRSGMIEVVAQTIKSCLDELPGFPRTQIGFATFDSTIHFYNMKASLTQPQMLVVSDLDDIFVPLPDDLLVNLSESRSVVETFLDSLPTMFQDNVNIESAFGPALKAAFMVMNQLGGKLLIFQSTLPSLGVGRLKLRGDDVRVYGTDKEHMLRLPEDPFYKQMAAEFSKYQISANVYAFSDKYTDIASLGTLAKYTGGQVYYYPGFQSTIHGVKLRHELRRDLTRETAWEAVLRIRCGKGVRFTTFHGNFMLRSTDLLALPAVDCDKAFAMQLSLEETLLTSQTMFFQVALLYTASCGERRIRVHTAAAPVVTDLGEMYRLADTGATASLLSRLVLEKTLSSKLEDARSAVQLRIVKALREYRNLYAVQHRLANRMIYPESLKFLPLYGLALCKSTPLRGGYADAPLDERCAVGYTMMALPIKGLLKLLYPSLIRFDEYLLKASAESDDSQIIKKRLPLTGESLDSRGLYVFDDGFRFIIWFGRVLSPDIAMNLLGADLAAELSKVTLNKHDNEMSRKLIRLLEKLRNTDCSYYQSCHLVRQGEQPREGFLILANLVEDQMGGNTGYADWMLQLSRQVQQ 1021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1235 1021 Gene3D Sec23/Sec24 helical domain 753 1019 - -
Bisa03g1235 1021 Gene3D - 300 752 - -
Bisa03g1235 1021 CDD Sec24-like 427 668 IPR041742 GO:0006886|GO:0006888|GO:0030127
Bisa03g1235 1021 Gene3D von Willebrand factor, type A domain 429 666 IPR036465 -
Bisa03g1235 1021 PANTHER SEC24-RELATED PROTEIN 153 1019 - -
Bisa03g1235 1021 Pfam Sec23/Sec24 beta-sandwich domain 669 752 IPR012990 -
Bisa03g1235 1021 MobiDBLite consensus disorder prediction 123 138 - -
Bisa03g1235 1021 MobiDBLite consensus disorder prediction 79 100 - -
Bisa03g1235 1021 FunFam protein transport protein Sec24D isoform X1 429 666 - -
Bisa03g1235 1021 Pfam Sec23/Sec24 helical domain 764 867 IPR006900 GO:0006886|GO:0006888|GO:0030127
Bisa03g1235 1021 SUPERFAMILY beta-sandwich domain of Sec23/24 194 762 - -
Bisa03g1235 1021 MobiDBLite consensus disorder prediction 196 217 - -
Bisa03g1235 1021 SUPERFAMILY Helical domain of Sec23/24 764 871 IPR036175 GO:0006886|GO:0006888|GO:0030127
Bisa03g1235 1021 Gene3D Severin 872 1000 IPR029006 -
Bisa03g1235 1021 Pfam Sec23/Sec24 zinc finger 353 390 IPR006895 GO:0006886|GO:0006888|GO:0008270|GO:0030127
Bisa03g1235 1021 Gene3D - 299 411 - -
Bisa03g1235 1021 MobiDBLite consensus disorder prediction 143 164 - -
Bisa03g1235 1021 SUPERFAMILY Zn-finger domain of Sec23/24 344 426 IPR036174 GO:0006886|GO:0006888|GO:0008270|GO:0030127
Bisa03g1235 1021 MobiDBLite consensus disorder prediction 1 224 - -
Bisa03g1235 1021 SUPERFAMILY C-terminal, gelsolin-like domain of Sec23/24 880 1021 IPR036180 -
Bisa03g1235 1021 Pfam Sec23/Sec24 trunk domain 427 663 IPR006896 GO:0006886|GO:0006888|GO:0030127
Bisa03g1235 1021 MobiDBLite consensus disorder prediction 51 67 - -
Bisa03g1235 1021 MobiDBLite consensus disorder prediction 165 187 - -
Bisa03g1235 1021 SUPERFAMILY vWA-like 427 667 IPR036465 -
Bisa03g1235 1021 MobiDBLite consensus disorder prediction 23 37 - -
Bisa03g1235 1021 MobiDBLite consensus disorder prediction 108 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1235 Bisa-ChrBisa03 16801584 16809177 Dispersed/Wgd