Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1224 ATGGGCGGAGGTGGAGCGACGCACGCGGAGGCGCAGTACTCGTCGGCGAAGATTTCGGTGTGGTGGGACATCGAGAACTGCCATGTCCCCAAAGGCTGCGATCCGCACGCCATCGCTCAGAACATTAGCTCGGCGTTGGTTCAGATGAACTATTGCGGCCCGGTTTCCATCTCTGCCTACGGCGATACTACTCGCATCACGGCCTCTGTACAGCAAGCTCTCTCCAGTACCGGAATCTCCCTCAACCATGTCCCAGCTGGTGTTAAAGATGCTAGCGACAAAAAGATTCTTGTTGACATGCTCTTTTGGGCTGTGGATAATCCTGCACCGGCCAATTATTTATTAATCTCTGGTGACCGAGACTTCTCTAACGCTCTTCATCAATTGAGGATGAGGAGGTATAATATTCTTCTTGCACAACCTCAAAAAGCATCTGCGCCCCTAGTTGCAGCTGCTAAGAGTGTATGGCTTTGGACTAGTCTCTTAGCCGGAGGACCTCCTCTAACTAATGGTGAATCACAACAATTTGGTAATAATAGCCAGCTATCAAGTTCTGACACCTTACAAATCCCTGTCTCTAGTGCTGTTCAGACAAAGCAACAAAGGGATTCCTTTCCTGAAGCTCATTCAGGAAATCATAAATTTCCAAATGCAGGAAGGGGATTAGAATCTAGAAACCAGGTGAAAACAAATTGGAGAAACCCAAGTCAACAAAATGGACCCAGATCTTTGAACCCACCTGTTGGACTTCAAGAAAATCATAGCAATATAAACTCTTATCGTCCTAGCAACTACAACCCAAATGTTCCTCCAAGCGGATCTGCTCCAAACTTTGTCCATGGCAGCCATGACCAGTTATGGAACAGTAGCAGCAATTTACCTGGAAATTGTCAGATTCCTTATTCGCAGCCGTTAAGACCCAACGGTTATCCACTGCAACCTGCTTTTGCACCCAGCAATCAAAATCCAACTAATTCTCATTCTTTTGCAACTTCATTAGTGCCTCCTAGGACTAGTGGACCCAGCTTCACCTCAGGACCAACTACAAATGTGCCAGATATTGGTAATCTGAACATTTCTGGATTGACGAAACAGAATCTTAACAATAATCCTTCACATCCTGTAAGATCAATTGACGAACAAAATAGACATAAGGTACATAGCACACAACAATCATACCGCGTTCAATCACATGGTCCACCTACATCTATGGCAGCAATGGGTAATAATAACTCTCCTGGTAATGGCTTGTGGGGATCTCCAGGATGCCCTAAACCTTCTGAATATGTACAAGGTCTTATAGGGGTTGTTTTACTTGCCTTAAACACACTAAAAAATGAAAAGATAATGCCAACTGAGGCAAATATAACTGATTGCATCCGTTATGGAGATCCCAAACACCGCAACAGTGATGTTAAGAAGGCTTTGGAGAGTGCTATTGAACAGCAGATGGTGGTGAAAAAGAATTTAGGTGCTTTGCAGTTGTATACTGGTAAGAATGATAAACTTTGGAAGTGTGTAAACCCTATTGGTGGTAATCCCAATCAGCACTCAAAAGAAACATGGGATGAAATCCAAAAATTTTTATCTACTACTTCTGGAAGATCATCAATAATGGGTACTCAATGCAAATATGAAGCAGGTATTGTAATAAAGAATATGTGCTTAAAATATCTCGCTTTGGGAGATGTCCTTCAGATTTTGAACATGGTGATTAGTCATAAAAAATGGATTGTGCATCGTCAGTCAGGATGGCAACCACTTAACATTACTCTACCTCAGGCAAACTCTGATTTAGGAATCACAGCTGACGGAAATGCATCCAAATCTGGTAGTGGTAATGAAAAGATGCTTGAAGAAAACTAA 1866 0.4293 MGGGGATHAEAQYSSAKISVWWDIENCHVPKGCDPHAIAQNISSALVQMNYCGPVSISAYGDTTRITASVQQALSSTGISLNHVPAGVKDASDKKILVDMLFWAVDNPAPANYLLISGDRDFSNALHQLRMRRYNILLAQPQKASAPLVAAAKSVWLWTSLLAGGPPLTNGESQQFGNNSQLSSSDTLQIPVSSAVQTKQQRDSFPEAHSGNHKFPNAGRGLESRNQVKTNWRNPSQQNGPRSLNPPVGLQENHSNINSYRPSNYNPNVPPSGSAPNFVHGSHDQLWNSSSNLPGNCQIPYSQPLRPNGYPLQPAFAPSNQNPTNSHSFATSLVPPRTSGPSFTSGPTTNVPDIGNLNISGLTKQNLNNNPSHPVRSIDEQNRHKVHSTQQSYRVQSHGPPTSMAAMGNNNSPGNGLWGSPGCPKPSEYVQGLIGVVLLALNTLKNEKIMPTEANITDCIRYGDPKHRNSDVKKALESAIEQQMVVKKNLGALQLYTGKNDKLWKCVNPIGGNPNQHSKETWDEIQKFLSTTSGRSSIMGTQCKYEAGIVIKNMCLKYLALGDVLQILNMVISHKKWIVHRQSGWQPLNITLPQANSDLGITADGNASKSGSGNEKMLEEN 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1224 621 Gene3D - 9 160 - -
Bisa03g1224 621 MobiDBLite consensus disorder prediction 193 291 - -
Bisa03g1224 621 PANTHER LIMKAIN B LKAP 13 488 IPR024768 GO:0005777|GO:0010468
Bisa03g1224 621 Pfam NYN domain 17 153 IPR021139 GO:0004540
Bisa03g1224 621 CDD PIN_limkain_b1_N_like 17 141 - -
Bisa03g1224 621 MobiDBLite consensus disorder prediction 335 358 - -
Bisa03g1224 621 MobiDBLite consensus disorder prediction 601 621 - -
Bisa03g1224 621 Pfam OST-HTH Associated domain 542 598 IPR025677 -
Bisa03g1224 621 MobiDBLite consensus disorder prediction 223 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1224 Bisa-ChrBisa03 16620918 16623485 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1224 9 200 C2H2 Transcription Factor Family AT5G61190 70.619 5.21e-85 285
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g1224 03 16620918 16623485 Bisa03g1224 03 16620918 16623485 ECH