Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1208 ATGAAAATCCAGGTGTTGGCGGAACGAGAGCAAAAAATTCAAACTGAAGTGAAAGAAATCCGAAAGGTGTTTTATTGTGATCTCTGCAACAAGCAATACAAATTGGCCATGGAATTTGAAGCACACCTGAGCTCATATGATCACAACCATAGAAAGCGTTTCAAAGAAATGAAGGACATGCATGGTAGTAGCTGCCGGGATGATAGGCAAAAACGAGAACAGCAACGTCAAGAGAGAGAATTGGCTAAGTTCGCCCAAATTGCCGATGCTCGAAAGCAGCAACATCTGCAACATCAACAAGAAGAATCTGGATGTGCTCCAGTTTCCTCTGAATCAAGAACTGCTACTGCTCTTGCTGATCAGGATCAGCGGAAGACTTTGAAGTTTGGGTTTTCTTCCAAGGGCAGTGCTGCCAAGAACTCATTCAGTGGTGCTGCAAAGAAGCAAAAAATTGCAATGTCTTCAGTTTTCGGTGACGATGCTGATGAAGAATAA 495 0.4303 MKIQVLAEREQKIQTEVKEIRKVFYCDLCNKQYKLAMEFEAHLSSYDHNHRKRFKEMKDMHGSSCRDDRQKREQQRQERELAKFAQIADARKQQHLQHQQEESGCAPVSSESRTATALADQDQRKTLKFGFSSKGSAAKNSFSGAAKKQKIAMSSVFGDDADEE 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1208 164 Pfam Zinc-finger double-stranded RNA-binding 24 51 IPR022755 -
Bisa03g1208 164 MobiDBLite consensus disorder prediction 58 86 - -
Bisa03g1208 164 MobiDBLite consensus disorder prediction 58 164 - -
Bisa03g1208 164 ProSitePatterns Zinc finger C2H2 type domain signature. 26 48 IPR013087 -
Bisa03g1208 164 MobiDBLite consensus disorder prediction 99 143 - -
Bisa03g1208 164 SUPERFAMILY beta-beta-alpha zinc fingers 11 52 IPR036236 -
Bisa03g1208 164 PANTHER FINGER DOMAIN PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G04180)-RELATED 2 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1208 Bisa-ChrBisa03 16514588 16515616 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1208 2 164 C2H2 Transcription Factor Family AT5G26610 63.855 2.10e-61 190