Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1191 ATGAAGCTCTTCCTCTCTCTGCTCCTGTTGTTAGTTACTGCCGTTGCAGCAGATCCCGACCTTCTTCAAGACCTCTGCGTCGCCGATCTCACCTCCGAGATTAAAGTGAATGGATTCACCTGCAAGGATGCTTCAAAGGTAACTCCGTCGGACTTTTTCTCCGACATACTGGCCAATCCAGGAGCCACCAATAACACCTTTGGCTCACTCGTCACCGGAGCCAACGTTCAGAAAATCCCCGGACTCAACACGCTCGGCGTCTCGCTCTCACGCATCGACTACGCGCCTGGTGGCCTCAATCCACCGCACACGCACCCACGCGCCACCGAGGTGGTTTATGTGCTCGACGGAGAGCTTAATGTGGGATTCATAACCACGTCCAATGAGCTCATATCCAAGAATATCAAGAAGGGTGAGATTTTTGTGTTCCCAAAAGGTTTGGTTCACTTCCAGAAGAACAATGGGAAGGTGGCTGCCTCTGTGATCGCAGCCTTCAACAGTCAGTTGCCGGGGACGCAGGCTATCTCCACCACCTTGTTCGCCGCCACTCCGCCGGTGCCGGACCACGTTCTGACGAAGGCGTTTCAGGTGGGAACGAAGGAGGTTCTGAAAATTAAGTCAAGGCTTGCACCCAAGAAGACAGTTAGGAGCTGA 654 0.5352 MKLFLSLLLLLVTAVAADPDLLQDLCVADLTSEIKVNGFTCKDASKVTPSDFFSDILANPGATNNTFGSLVTGANVQKIPGLNTLGVSLSRIDYAPGGLNPPHTHPRATEVVYVLDGELNVGFITTSNELISKNIKKGEIFVFPKGLVHFQKNNGKVAASVIAAFNSQLPGTQAISTTLFAATPPVPDHVLTKAFQVGTKEVLKIKSRLAPKKTVRS 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1191 217 FunFam germin-like protein subfamily 2 member 1 17 211 - -
Bisa03g1191 217 Pfam Cupin 57 202 IPR006045 -
Bisa03g1191 217 CDD cupin_OxOx 18 209 IPR001929 GO:0030145
Bisa03g1191 217 Gene3D Jelly Rolls 17 211 IPR014710 -
Bisa03g1191 217 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 11 207 - -
Bisa03g1191 217 SMART Cupin_1_3 54 203 IPR006045 -
Bisa03g1191 217 PRINTS Germin signature 133 153 IPR001929 GO:0030145
Bisa03g1191 217 PRINTS Germin signature 166 181 IPR001929 GO:0030145
Bisa03g1191 217 PRINTS Germin signature 103 123 IPR001929 GO:0030145
Bisa03g1191 217 SUPERFAMILY RmlC-like cupins 18 209 IPR011051 -
Bisa03g1191 217 ProSitePatterns Germin family signature. 98 111 IPR019780 GO:0030145
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1191 Bisa-ChrBisa03 16205288 16206389 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1191 1 213 Miscellaneous Gene Families AT3G05930 56.075 9.73e-89 259