Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bisa03g1187 | ATGGGAACAGGATATTTCCTCAAAAGTGTGGACGTCAATCTCAATATTAATTCACTCTCTGAACCATCAAGTTCTAACATTGATGTGTTTATCGGATTTTTAACAATAATTTTCCAACATAATGCTCAGAACAACCACAATGGATTTCCTAATTGGACAATTAAGAAAGAGTTCGTTATTCTCTTTTTCCAGAGAACCCGTTGGCTTGCGTTGGCTCCCCGCTATTACGTCGGTGTTGATCTGTCTTCGCTGTCTTTTAGAGCTACCCAGCATCCACCCAAGCTCTTGCTTCAGAGTTTATATACTTATGAATGGCGTGGAGGGAGCTTGGAAGAAAGGTCAGTTGGCATTTATTATCATAAAGTTTTTGCCCCTTGGTGTTATTCATCCATGACATTTACTCAAATCTATTGTGAAAGAATATACATGAACTTTGCCAGGGCTTTGATTACAGTGCCATCTAGGCATGCTGTAAGGGCATGTTCTTCATCTACCTTTGCAGCAAATTCTGTTTATGCATCACCAAGATGCTTGCCTGAGTTCATCAGGGGCCCATCTACATTAGAAGCTGGATTTTGCAATGGAACAAAAGAACATGGACTACAGAGTCGGTGCTTACATGCTAGCCCAGAAGTCTGGGCAAGGAGAAATGAAGAGGTATTTGGTTTGAAGACACCAAAGAAGGAGAAGCGTGTGAAAAGGGACAGTAAAAATCAACCCCCTGTTGAAGCACCATATGTTCCTCGTAATGTGGTCAAATCTACTAAATCTCGTGATAAAACCATTGAAATATTTGAAGGCATGACCATCGTTGAGATGGCAAAGCGTACTGGAAAGTCAGTATCTGCTCTGCAGGATATTCTTATAAATGTTGGGGAAAAGGTTGAATCAGAGTTTGAGCCTCTTAGCATTGATATTGCAGAGCTTGTTGCAATGGAAGTTGGTATCAATGTTAAGAGGCTACATTCTGCTGAAGGTGCAGAAATTTTACCACGCCCTGCAGTTGTAACAGTGATGGGTCATGTTGATCATGGTAAAACTTCCCTTCTTGATGCTTTGCGTCAAACGTCAGTGGCAGCCAAGGAGGCTGGAGGCATAACTCAGCATCTAGGTGCCTTTGTGGTGGCAATGCCATCAGGAGCTTCAATCACATTTCTTGACACCCCTGGTCATGCTGCTTTTAGTGCAATGCGAGCAAGAGGTGCAGCTGTCACAGATGTAGTAGTGCTTGTTGTTGCTGCAGATGATGGAGTGATGCCTCAAACCCTTGAAGCCATATCCCATGCAAAAGCTGCTAATGTTCCCATTGTAGTTGCAATTAACAAATGTGATAAACCAGGTGCAAATCCTGAAAGGGTAAAACTGCAGCTTGCGTCAGAGGGCTTGCTGCTGGAAGATATGGGTGGGGATGTTCAGGTGGTTGAAGTTTCAGCAACTATGAAAACTGGACTGGATAACTTGGAGGAAGCTTTGCTCCTTCAGGCTGAAGTGATGGATTTGAAAGCTCGAATTGATGGGCCTGCTCAAGCTTATGTGGTTGAAGCAAGACTTGATAAAGGACGAGGTCCATTGGCTACTGCTATTGTGAAGGCAGGGACTTTAGTTTGTGGTCAGCATGTGGTTGTAGGCTTGGAGTGGGGCAAAATAAGGGCTATTAGAGAAGTAACTGGGAAGTTGACTGACAGAGCAACACCTGCAATGCCTGTTGAGATTGAAGGGCTTCGAGCGACTCCGATGGCTGGTGATGATGTTATTGTTGTTCACTCCGAGGAGCGAGCTCGACTGCTTAGTGCTGGTAGAAAAAGGAAATATGAGAAGGATAGGCTCAATAAATTGATCCAGGAAAAGGAAGATTCTTTGGAGTCATCCAAGGATGTCCCTCAGAGGGTTGAAATGCCAATAATAGTAAAATCTGATGTTCAGGGCACTGTTCAAGCTGTCACAGATGCATTGAGAACTTTAAATAGTCCCCAGGTTTTCGTGAATGTTGTCCATGTTGGTGTAGGGCCTGTTTCTCAATCTGATGTAGACCTAGCAAAGGCTTGTGGTGCATGCATAGTGGGATTCAATGTGAAGAGTCCACCTATTTCTCTTAGTCAGGCAGCTAGTCATGCCAATATAAGGATAGTGCAGCACCGTGTGATTTACCACCTTTTGGAGGAGATAGGCAATATGATAATAGAGAAGGCCCCCGGAACTTCTGAAACCCAGGTAGCTGGTGAGGCAGAGGTGCTGAGTATCTTTGAGCTTAAAGGGAGGAGCAAGTCCAAGGGACCCGATGTGAAGATAGCCGGTTGCCGGGTTATTGATGGTTGTGTGACTAAATCAGGAACTATGAGGCTGCTGAGGAGTGGGGAAGTGGTGTTTGAAGGGAACTGTGCATCTCTGAAGAGGGAGACGCGTGATGTGGAGACAGTGAAGAAGGGAAATGAGTGTGGAATGGTAATAAGTGATTGCCATGATTTCCAGGTTGGAGACGTCATACAGTGCTTGGAACAAGTGGTAAGGAAGCCCAAGTTCATCAAGTCACAGAGTGGTGCTGTTCGGATCGAGTGCTGA | 2559 | 0.4459 | MGTGYFLKSVDVNLNINSLSEPSSSNIDVFIGFLTIIFQHNAQNNHNGFPNWTIKKEFVILFFQRTRWLALAPRYYVGVDLSSLSFRATQHPPKLLLQSLYTYEWRGGSLEERSVGIYYHKVFAPWCYSSMTFTQIYCERIYMNFARALITVPSRHAVRACSSSTFAANSVYASPRCLPEFIRGPSTLEAGFCNGTKEHGLQSRCLHASPEVWARRNEEVFGLKTPKKEKRVKRDSKNQPPVEAPYVPRNVVKSTKSRDKTIEIFEGMTIVEMAKRTGKSVSALQDILINVGEKVESEFEPLSIDIAELVAMEVGINVKRLHSAEGAEILPRPAVVTVMGHVDHGKTSLLDALRQTSVAAKEAGGITQHLGAFVVAMPSGASITFLDTPGHAAFSAMRARGAAVTDVVVLVVAADDGVMPQTLEAISHAKAANVPIVVAINKCDKPGANPERVKLQLASEGLLLEDMGGDVQVVEVSATMKTGLDNLEEALLLQAEVMDLKARIDGPAQAYVVEARLDKGRGPLATAIVKAGTLVCGQHVVVGLEWGKIRAIREVTGKLTDRATPAMPVEIEGLRATPMAGDDVIVVHSEERARLLSAGRKRKYEKDRLNKLIQEKEDSLESSKDVPQRVEMPIIVKSDVQGTVQAVTDALRTLNSPQVFVNVVHVGVGPVSQSDVDLAKACGACIVGFNVKSPPISLSQAASHANIRIVQHRVIYHLLEEIGNMIIEKAPGTSETQVAGEAEVLSIFELKGRSKSKGPDVKIAGCRVIDGCVTKSGTMRLLRSGEVVFEGNCASLKRETRDVETVKKGNECGMVISDCHDFQVGDVIQCLEQVVRKPKFIKSQSGAVRIEC | 852 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bisa03g1187 | 852 | Gene3D | Translation factors | 734 | 837 | - | - | |
Bisa03g1187 | 852 | SUPERFAMILY | Translation proteins | 505 | 587 | IPR009000 | - | |
Bisa03g1187 | 852 | CDD | IF2_eIF5B | 335 | 498 | - | - | |
Bisa03g1187 | 852 | ProSiteProfiles | Translational (tr)-type guanine nucleotide-binding (G) domain profile. | 331 | 501 | IPR000795 | GO:0003924|GO:0005525 | |
Bisa03g1187 | 852 | Gene3D | Translation factors | 504 | 621 | - | - | |
Bisa03g1187 | 852 | FunFam | Translation initiation factor IF-2 | 735 | 839 | - | - | |
Bisa03g1187 | 852 | Pfam | Elongation factor Tu GTP binding domain | 336 | 492 | IPR000795 | GO:0003924|GO:0005525 | |
Bisa03g1187 | 852 | CDD | mtIF2_IVc | 740 | 830 | - | - | |
Bisa03g1187 | 852 | PANTHER | TRANSLATION INITIATION FACTOR IF-2-RELATED | 228 | 847 | IPR015760 | - | |
Bisa03g1187 | 852 | NCBIfam | small GTP-binding protein domain | 334 | 485 | IPR005225 | GO:0005525 | |
Bisa03g1187 | 852 | CDD | IF2_mtIF2_II | 507 | 602 | IPR044145 | - | |
Bisa03g1187 | 852 | Gene3D | - | 628 | 732 | IPR036925 | - | |
Bisa03g1187 | 852 | FunFam | Translation initiation factor IF-2 | 328 | 503 | - | - | |
Bisa03g1187 | 852 | Gene3D | - | 329 | 503 | IPR027417 | - | |
Bisa03g1187 | 852 | Coils | Coil | 606 | 626 | - | - | |
Bisa03g1187 | 852 | Pfam | Translation-initiation factor 2 | 615 | 722 | IPR023115 | - | |
Bisa03g1187 | 852 | SUPERFAMILY | Translation proteins | 735 | 837 | IPR009000 | - | |
Bisa03g1187 | 852 | FunFam | Translation initiation factor IF-2 | 627 | 734 | - | - | |
Bisa03g1187 | 852 | NCBIfam | translation initiation factor IF-2 | 259 | 835 | IPR000178 | GO:0003743|GO:0003924|GO:0005525|GO:0006413 | |
Bisa03g1187 | 852 | SUPERFAMILY | Initiation factor IF2/eIF5b, domain 3 | 622 | 739 | IPR036925 | - | |
Bisa03g1187 | 852 | Hamap | Translation initiation factor IF-2 [infB]. | 13 | 838 | IPR000178 | GO:0003743|GO:0003924|GO:0005525|GO:0006413 | |
Bisa03g1187 | 852 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 330 | 501 | IPR027417 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bisa03g1187 | Bisa-ChrBisa03 | 16140842 | 16146518 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bisa03g1187 | 322 | 816 | Eukaryotic Initiation Factors Gene Family | AT1G76810 | 26.944 | 1.92e-28 | 121 |