Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1187 ATGGGAACAGGATATTTCCTCAAAAGTGTGGACGTCAATCTCAATATTAATTCACTCTCTGAACCATCAAGTTCTAACATTGATGTGTTTATCGGATTTTTAACAATAATTTTCCAACATAATGCTCAGAACAACCACAATGGATTTCCTAATTGGACAATTAAGAAAGAGTTCGTTATTCTCTTTTTCCAGAGAACCCGTTGGCTTGCGTTGGCTCCCCGCTATTACGTCGGTGTTGATCTGTCTTCGCTGTCTTTTAGAGCTACCCAGCATCCACCCAAGCTCTTGCTTCAGAGTTTATATACTTATGAATGGCGTGGAGGGAGCTTGGAAGAAAGGTCAGTTGGCATTTATTATCATAAAGTTTTTGCCCCTTGGTGTTATTCATCCATGACATTTACTCAAATCTATTGTGAAAGAATATACATGAACTTTGCCAGGGCTTTGATTACAGTGCCATCTAGGCATGCTGTAAGGGCATGTTCTTCATCTACCTTTGCAGCAAATTCTGTTTATGCATCACCAAGATGCTTGCCTGAGTTCATCAGGGGCCCATCTACATTAGAAGCTGGATTTTGCAATGGAACAAAAGAACATGGACTACAGAGTCGGTGCTTACATGCTAGCCCAGAAGTCTGGGCAAGGAGAAATGAAGAGGTATTTGGTTTGAAGACACCAAAGAAGGAGAAGCGTGTGAAAAGGGACAGTAAAAATCAACCCCCTGTTGAAGCACCATATGTTCCTCGTAATGTGGTCAAATCTACTAAATCTCGTGATAAAACCATTGAAATATTTGAAGGCATGACCATCGTTGAGATGGCAAAGCGTACTGGAAAGTCAGTATCTGCTCTGCAGGATATTCTTATAAATGTTGGGGAAAAGGTTGAATCAGAGTTTGAGCCTCTTAGCATTGATATTGCAGAGCTTGTTGCAATGGAAGTTGGTATCAATGTTAAGAGGCTACATTCTGCTGAAGGTGCAGAAATTTTACCACGCCCTGCAGTTGTAACAGTGATGGGTCATGTTGATCATGGTAAAACTTCCCTTCTTGATGCTTTGCGTCAAACGTCAGTGGCAGCCAAGGAGGCTGGAGGCATAACTCAGCATCTAGGTGCCTTTGTGGTGGCAATGCCATCAGGAGCTTCAATCACATTTCTTGACACCCCTGGTCATGCTGCTTTTAGTGCAATGCGAGCAAGAGGTGCAGCTGTCACAGATGTAGTAGTGCTTGTTGTTGCTGCAGATGATGGAGTGATGCCTCAAACCCTTGAAGCCATATCCCATGCAAAAGCTGCTAATGTTCCCATTGTAGTTGCAATTAACAAATGTGATAAACCAGGTGCAAATCCTGAAAGGGTAAAACTGCAGCTTGCGTCAGAGGGCTTGCTGCTGGAAGATATGGGTGGGGATGTTCAGGTGGTTGAAGTTTCAGCAACTATGAAAACTGGACTGGATAACTTGGAGGAAGCTTTGCTCCTTCAGGCTGAAGTGATGGATTTGAAAGCTCGAATTGATGGGCCTGCTCAAGCTTATGTGGTTGAAGCAAGACTTGATAAAGGACGAGGTCCATTGGCTACTGCTATTGTGAAGGCAGGGACTTTAGTTTGTGGTCAGCATGTGGTTGTAGGCTTGGAGTGGGGCAAAATAAGGGCTATTAGAGAAGTAACTGGGAAGTTGACTGACAGAGCAACACCTGCAATGCCTGTTGAGATTGAAGGGCTTCGAGCGACTCCGATGGCTGGTGATGATGTTATTGTTGTTCACTCCGAGGAGCGAGCTCGACTGCTTAGTGCTGGTAGAAAAAGGAAATATGAGAAGGATAGGCTCAATAAATTGATCCAGGAAAAGGAAGATTCTTTGGAGTCATCCAAGGATGTCCCTCAGAGGGTTGAAATGCCAATAATAGTAAAATCTGATGTTCAGGGCACTGTTCAAGCTGTCACAGATGCATTGAGAACTTTAAATAGTCCCCAGGTTTTCGTGAATGTTGTCCATGTTGGTGTAGGGCCTGTTTCTCAATCTGATGTAGACCTAGCAAAGGCTTGTGGTGCATGCATAGTGGGATTCAATGTGAAGAGTCCACCTATTTCTCTTAGTCAGGCAGCTAGTCATGCCAATATAAGGATAGTGCAGCACCGTGTGATTTACCACCTTTTGGAGGAGATAGGCAATATGATAATAGAGAAGGCCCCCGGAACTTCTGAAACCCAGGTAGCTGGTGAGGCAGAGGTGCTGAGTATCTTTGAGCTTAAAGGGAGGAGCAAGTCCAAGGGACCCGATGTGAAGATAGCCGGTTGCCGGGTTATTGATGGTTGTGTGACTAAATCAGGAACTATGAGGCTGCTGAGGAGTGGGGAAGTGGTGTTTGAAGGGAACTGTGCATCTCTGAAGAGGGAGACGCGTGATGTGGAGACAGTGAAGAAGGGAAATGAGTGTGGAATGGTAATAAGTGATTGCCATGATTTCCAGGTTGGAGACGTCATACAGTGCTTGGAACAAGTGGTAAGGAAGCCCAAGTTCATCAAGTCACAGAGTGGTGCTGTTCGGATCGAGTGCTGA 2559 0.4459 MGTGYFLKSVDVNLNINSLSEPSSSNIDVFIGFLTIIFQHNAQNNHNGFPNWTIKKEFVILFFQRTRWLALAPRYYVGVDLSSLSFRATQHPPKLLLQSLYTYEWRGGSLEERSVGIYYHKVFAPWCYSSMTFTQIYCERIYMNFARALITVPSRHAVRACSSSTFAANSVYASPRCLPEFIRGPSTLEAGFCNGTKEHGLQSRCLHASPEVWARRNEEVFGLKTPKKEKRVKRDSKNQPPVEAPYVPRNVVKSTKSRDKTIEIFEGMTIVEMAKRTGKSVSALQDILINVGEKVESEFEPLSIDIAELVAMEVGINVKRLHSAEGAEILPRPAVVTVMGHVDHGKTSLLDALRQTSVAAKEAGGITQHLGAFVVAMPSGASITFLDTPGHAAFSAMRARGAAVTDVVVLVVAADDGVMPQTLEAISHAKAANVPIVVAINKCDKPGANPERVKLQLASEGLLLEDMGGDVQVVEVSATMKTGLDNLEEALLLQAEVMDLKARIDGPAQAYVVEARLDKGRGPLATAIVKAGTLVCGQHVVVGLEWGKIRAIREVTGKLTDRATPAMPVEIEGLRATPMAGDDVIVVHSEERARLLSAGRKRKYEKDRLNKLIQEKEDSLESSKDVPQRVEMPIIVKSDVQGTVQAVTDALRTLNSPQVFVNVVHVGVGPVSQSDVDLAKACGACIVGFNVKSPPISLSQAASHANIRIVQHRVIYHLLEEIGNMIIEKAPGTSETQVAGEAEVLSIFELKGRSKSKGPDVKIAGCRVIDGCVTKSGTMRLLRSGEVVFEGNCASLKRETRDVETVKKGNECGMVISDCHDFQVGDVIQCLEQVVRKPKFIKSQSGAVRIEC 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1187 852 Gene3D Translation factors 734 837 - -
Bisa03g1187 852 SUPERFAMILY Translation proteins 505 587 IPR009000 -
Bisa03g1187 852 CDD IF2_eIF5B 335 498 - -
Bisa03g1187 852 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 331 501 IPR000795 GO:0003924|GO:0005525
Bisa03g1187 852 Gene3D Translation factors 504 621 - -
Bisa03g1187 852 FunFam Translation initiation factor IF-2 735 839 - -
Bisa03g1187 852 Pfam Elongation factor Tu GTP binding domain 336 492 IPR000795 GO:0003924|GO:0005525
Bisa03g1187 852 CDD mtIF2_IVc 740 830 - -
Bisa03g1187 852 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 228 847 IPR015760 -
Bisa03g1187 852 NCBIfam small GTP-binding protein domain 334 485 IPR005225 GO:0005525
Bisa03g1187 852 CDD IF2_mtIF2_II 507 602 IPR044145 -
Bisa03g1187 852 Gene3D - 628 732 IPR036925 -
Bisa03g1187 852 FunFam Translation initiation factor IF-2 328 503 - -
Bisa03g1187 852 Gene3D - 329 503 IPR027417 -
Bisa03g1187 852 Coils Coil 606 626 - -
Bisa03g1187 852 Pfam Translation-initiation factor 2 615 722 IPR023115 -
Bisa03g1187 852 SUPERFAMILY Translation proteins 735 837 IPR009000 -
Bisa03g1187 852 FunFam Translation initiation factor IF-2 627 734 - -
Bisa03g1187 852 NCBIfam translation initiation factor IF-2 259 835 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Bisa03g1187 852 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 622 739 IPR036925 -
Bisa03g1187 852 Hamap Translation initiation factor IF-2 [infB]. 13 838 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Bisa03g1187 852 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 330 501 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1187 Bisa-ChrBisa03 16140842 16146518 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1187 322 816 Eukaryotic Initiation Factors Gene Family AT1G76810 26.944 1.92e-28 121