Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1152 ATGGAAAACCAACACCACCACCGCCATAAATTGACCTTCTCGACCTCCGGCGATGACTTTCTCAATGATCGAATAAACGACAACTCCAGCGATCGTCCTACCATCAAAGAAATGGATTTCTTCTCCGCTTCGGCCAGCAAATCTAATGAAACGACATTGAATCATCACCACCGTCAAGATCTTCATGGATCATCGAGTACTCCCTTATCTGATCGCCCTATCAACACCGGACTGAATTTAACGTCTTCAAGTTTTGAAATGCCAAGATCTGAAAGTGACGAGAAGCTCTACACTGAACTGAGTTCACTTCAAGGTGAATTGCGGAGGATGCATGAAGAGAATCATAAGTTAAAAAGTATGCTGGATCAAATCACGAAAAGTTATAGCCAACTACAAGCTCAGCTGATCATAGCTTTGCATAAGCAGAAGTCTCAGAAAGTTGAAGCCAATGGCATAATGTCGGGACAGCAATTATTGGACCCACGACCGTCTACGAATAGAGACGTGAATGAAGTATCGGTTTCAGACGGTAAGAGTCCTGAGCTTTCGGTCTCTCCCTCATCAAACAATGTGGAGGTAATGTCAAACCAACGTGAACAGCACTACCAGTTGACTAAGCTTCTTGGAAAGCAAGCAGGTTGTCCCGAAGATTCCTCTCAGAGTTGGGGATCATCCAAGAGCCCCAAGCTACATGATTCCAAAAACGAAGATCACAATGCGGATATCCCTTTCAGAAAAGCCAGGGTTTCTGTGCGTGCAAGATCAGAAGCTCCTATGATTAGTGATGGATGTCAATGGAGGAAATATGGTCAAAAAATGGCCAAGGGTAACCCCTGCCCTCGTGCCTACTATCGTTGCACTATGGCTGTAGGATGCCCCGTTCGCAAGCAGGTGCAAAGATGTGCGGAGGACAAGACAGTGCTGATAACAACATACGAAGGGAATCACAACCATCCTCTCCCACCGGCAGCCACCGCAATGGCGAATACGACGTCGGCAGCGGCGGCGATGCTCCTATCGGGATCAACTACGAGTAAGGAATCCTCAACAAACTCTGGAGGGTACTTCTCTTCTATGCCCTACGCCTCCATGGCAACCCTATCAGCCTCCGCCCCATTTCCCACCATCACCCTCGACTTGACTCACACCCCCAACGGCCTCCACCTTCACCGGCTACCGCCTCCGGGGGTCACATTTCCTTTGCCACTAATGGGGCATCCCATGTTAAGGGTACCGGCTGTGCCGGTGGGGCAACGACAGGGGGCTTCGCCTTCGTCGTCTATGGTGGAGACGGTGAGTGCGGCTATTGCTTCTGATCCCAATTTCACTGCGGTTCTCGCTGCAGCGATTTCTTCGATCTTCGGGAGTAATGTCAATGGCAATGGAGAAGTTGGAAATGTTGGTTTTTCTCTTAATGGAGTGTTTGTGTCGCCTGGGTCCCCGCAGCTTCCTCAGTCCTGCACTACGTTGTCCACCAATTAG 1482 0.4933 MENQHHHRHKLTFSTSGDDFLNDRINDNSSDRPTIKEMDFFSASASKSNETTLNHHHRQDLHGSSSTPLSDRPINTGLNLTSSSFEMPRSESDEKLYTELSSLQGELRRMHEENHKLKSMLDQITKSYSQLQAQLIIALHKQKSQKVEANGIMSGQQLLDPRPSTNRDVNEVSVSDGKSPELSVSPSSNNVEVMSNQREQHYQLTKLLGKQAGCPEDSSQSWGSSKSPKLHDSKNEDHNADIPFRKARVSVRARSEAPMISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDKTVLITTYEGNHNHPLPPAATAMANTTSAAAAMLLSGSTTSKESSTNSGGYFSSMPYASMATLSASAPFPTITLDLTHTPNGLHLHRLPPPGVTFPLPLMGHPMLRVPAVPVGQRQGASPSSSMVETVSAAIASDPNFTAVLAAAISSIFGSNVNGNGEVGNVGFSLNGVFVSPGSPQLPQSCTTLSTN 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1152 493 SUPERFAMILY WRKY DNA-binding domain 253 321 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa03g1152 493 Coils Coil 100 134 - -
Bisa03g1152 493 MobiDBLite consensus disorder prediction 214 228 - -
Bisa03g1152 493 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 87 458 IPR044810 GO:0003700
Bisa03g1152 493 MobiDBLite consensus disorder prediction 155 190 - -
Bisa03g1152 493 MobiDBLite consensus disorder prediction 1 34 - -
Bisa03g1152 493 MobiDBLite consensus disorder prediction 212 240 - -
Bisa03g1152 493 ProSiteProfiles WRKY domain profile. 255 321 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa03g1152 493 Pfam WRKY DNA -binding domain 262 319 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa03g1152 493 Gene3D WRKY domain 245 322 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa03g1152 493 FunFam probable WRKY transcription factor 31 245 322 - -
Bisa03g1152 493 MobiDBLite consensus disorder prediction 46 74 - -
Bisa03g1152 493 SMART WRKY_cls 260 320 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1152 Bisa-ChrBisa03 15670404 15673502 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1152 1 493 WRKY Transcription Factor Family AT4G01720 41.622 3.86e-92 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bisa03g1152 WRKY 5e-24 CL0274