Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1140 ATGGAAACTAGATTTGGCGCGGAAGCTTTTCATTTGTATGGTATGGGTTCGTCGGATTTGCAGTCCGTGGGGAAGAGGTCCGTGGAATGGGATTTGAACGATTGGAAATGGGATGGGGATCTTTTTATAGCTAGTCCGATGACTCCGGTGCCAGCAGATAGCGTAGGCCGACAGTTATTCCCTCTTGGGTCTGGGATCCCTGTGGCCGGAGGGTCCTCCAACAGTTCTTCCTCATGCTCCGATGAAGTAAATCTTGGGATTGACAAGAGGAAGAAGGAAGGAGAGAAGAAAAGGAGGGTTATTGTGGTTGAGGATGATAGTTTGAATGAGGAAGCAGGTAGCCTTAGCTTAAAGCTTGGTGGACATGATTCTCCAATTGCTGACAGGGAGATAGCAAGTTGGGAAGGAACGAATGGGAAGAAAACCAGATTAGCTGGAGGTACTTCAAATCGAGCTGTTTGTCAGGTGGAAGACTGTGGGGCAGATCTGAGCACTGCTAAGGATTATCACAGACGTCATAAAGTTTGCGAGATGCACTCAAAGGCCAGCAGGGCACTTTTGGGGAATGTAATGCAGCGGTTCTGTCAGCAATGTAGCAGGTTTCACGTACTTCAGGAGTTTGATGAGGGAAAGAGAAGCTGTCGACGACGCTTGGCTGGCCATAATAAAAGGAGGCGGAAAACAAATAATGATGCTGTTCCAAATGGAAGTCCACTAAATGATGATCAGACTAGTAGTTATCTGTTGATTAGTTTATTGAAGATACTTACAAATATGCATTCTAACAGGTCAAATCAGACCACAGATCAAGATCTGCTGTCTCATCTTCTAAGTAGCCTAACTAGTCAAAATGATGAACAGAGGGGCAAGAGCTTGTCTAACCTTTTGCGGGAACCAGAGAATTTGGTGAAAGAAGGCAGTTCTCCTGGGCAGTTGGAATTGGTTTCTACTTTATTCTCAAATGGTTCTCAAGGCTCTCCAACTGTTATAAGACAATCGCAGACAACATCTCTAACTGAAATTCAACATCAAGGGATGCATGATGCAAGGGCAACGACTGCTGATCAACAAACTATGTCTTCTACTAAACCTAGCATTTCAAACAGTCCTCCAGCTCACTCAGAACCCAGAGACAGTGTTGCTGGACAGGTCAAGATGAATAATTTTGATTTGAATGACATATATATTGACTCAGATGATGGTGCAGAAGATATAGAAAGATTGCCCGTCTCTGCAAATATTGGGGCTAGTTCTCTTGATTATCCATGGGCACGAGACTCTCATCAGTCAAGTCCACCTCAAACAAGTGGAAATTCAGATTCTGGATCTGCCCAATCCCCTTCTAGTTCAAGTGGAGAAGCTCAGAGCCGCACAGATCGAATTGTTTTTAAACTCTTTGGTAAAGAACCAAATGATTTTCCTTTTGTCCTTAGAGAACAGATTCTTGCCTGGTTATCCCACAGTCCTACTGACATTGAGAGCTACATACGGCCTGGATGTGTCGTCTTGACTATTTATCTTCGTCAGGCTGAAGCTGTGTGGGAGGAGCTGTGCTATGATCTGACTTCAAGTTTGAATAGGCTTCTGGATGCCTCAGATGGTGCTTTTTGGAGAAGTGGATGGGTTTACACAAGGGTGCAGCATCAGATTGCCTTCATTTTCGATGGTCAGGTTGTCATAGATACATCCTTACCTCTAAGAAGTAACAATTATAGTAAGATTTTAAGTGTTAGTCCGATTGCTGTACCGGCATTCAAAAGAGCTCAATTTTCAGTCAAGGGTGTTAATCTGGTCTGCCCGGCCACTAGGTTATTATGTGCATTAGAAGGCAAATATCTGACCTGTGAAGATGCTCATGAGCCAATGGAGCGGTGCTCCAACGAACTTGATGAGCTCCAACGCGTCCAATTTTCTTGTTCTCTCCCTGTGATGAGTGGAAGGGGATTTATTGAGATTGAGGACCAGGGCTTGAGCAGCAGCTTTTTTCCATTCATAGTTACGGAGCAGGATGTTTGCTCAGAAATCTGTTCTCTTGAGCCTCTACTAGAATCAGGCAAAGCTGATTCTGATATTGCAGGATCTGGAAAAAGTATAGCAAGAAGTCAAGCCATTGATTTTATTCATGAAATGGGTTGGCTTCTCCACAGAAGCCAGTTGAAATCTAGGCTGGTTCACTTAAACTCTAGTGCAGATCTTTTTCCATTAAAACGGTTCAAGTGGCTCATGGAGTACTCTATGGACCATGATTGGTGTGCGGTGGTGAAGAAACTACTGAACCTAGTACTTGACGGAACTGTGGATACAGGAGATCACCCTTCCAAGTATTTTGCACTTTCAGAGATGGGTCTCCTTCATAAAGCTGTTAGGAAAAATAGCAAGCGACTAGTGGAGTTGCTTTTGACACATGTCCCTGAGAATATTTCTGATAAACTGGTGCCAGAAAACCGGGCATTGGTTGAGGTTGGGAACCTGAGTTTCTTGTTTAGACCTGACGTTGGTGGTCCTGCGGGCTTGACACCACTGCACATTGCAGCTGGAAAAGATGGTTCTGAGGATGTATTGGATGCTTTAACTGATGATCCTTGCATGGTGGGAATTGAAGCATGGAAGAGTGCCCGTGACAGCACAGGCTCCACACCTGAAGATTATGCCCGCTTACGGGGCCATTATGCTTATATTCACCTGGTGCAAAAGAAAATCAACAAGAGACAAGCAGCAGCAGCTCCTCACGTGTTGGTAGATATCCCAAGCAATCTGACAGAGTGCAGTACAAAGCAGAAGCAAACCGAGTCATCCACTACCTTTGAGATCGGAAAGGCTGAAGGAAGCCGTGGGCAAGGGCACTGCAAGCTTTGTGACTTTAAATTGTCTTGTAGAACTGCTGTTGGAAGGTCTTTCGTGTACAAACCTGCCATGCTATCAATGGTGGCCGTAGCGGCAGTGTGTGTCTGCGTGGCCCTTCTCTTTAAGAGCTCACCTGAAGTTGTTTATGTGTTCCAACCCTTCAGGTGGGAATCGTTGGATTTCGGAACAAGCTGA 3039 0.4498 METRFGAEAFHLYGMGSSDLQSVGKRSVEWDLNDWKWDGDLFIASPMTPVPADSVGRQLFPLGSGIPVAGGSSNSSSSCSDEVNLGIDKRKKEGEKKRRVIVVEDDSLNEEAGSLSLKLGGHDSPIADREIASWEGTNGKKTRLAGGTSNRAVCQVEDCGADLSTAKDYHRRHKVCEMHSKASRALLGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTNNDAVPNGSPLNDDQTSSYLLISLLKILTNMHSNRSNQTTDQDLLSHLLSSLTSQNDEQRGKSLSNLLREPENLVKEGSSPGQLELVSTLFSNGSQGSPTVIRQSQTTSLTEIQHQGMHDARATTADQQTMSSTKPSISNSPPAHSEPRDSVAGQVKMNNFDLNDIYIDSDDGAEDIERLPVSANIGASSLDYPWARDSHQSSPPQTSGNSDSGSAQSPSSSSGEAQSRTDRIVFKLFGKEPNDFPFVLREQILAWLSHSPTDIESYIRPGCVVLTIYLRQAEAVWEELCYDLTSSLNRLLDASDGAFWRSGWVYTRVQHQIAFIFDGQVVIDTSLPLRSNNYSKILSVSPIAVPAFKRAQFSVKGVNLVCPATRLLCALEGKYLTCEDAHEPMERCSNELDELQRVQFSCSLPVMSGRGFIEIEDQGLSSSFFPFIVTEQDVCSEICSLEPLLESGKADSDIAGSGKSIARSQAIDFIHEMGWLLHRSQLKSRLVHLNSSADLFPLKRFKWLMEYSMDHDWCAVVKKLLNLVLDGTVDTGDHPSKYFALSEMGLLHKAVRKNSKRLVELLLTHVPENISDKLVPENRALVEVGNLSFLFRPDVGGPAGLTPLHIAAGKDGSEDVLDALTDDPCMVGIEAWKSARDSTGSTPEDYARLRGHYAYIHLVQKKINKRQAAAAPHVLVDIPSNLTECSTKQKQTESSTTFEIGKAEGSRGQGHCKLCDFKLSCRTAVGRSFVYKPAMLSMVAVAAVCVCVALLFKSSPEVVYVFQPFRWESLDFGTS 1012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1140 1012 MobiDBLite consensus disorder prediction 349 374 - -
Bisa03g1140 1012 SUPERFAMILY Ankyrin repeat 780 894 IPR036770 -
Bisa03g1140 1012 MobiDBLite consensus disorder prediction 339 380 - -
Bisa03g1140 1012 MobiDBLite consensus disorder prediction 421 456 - -
Bisa03g1140 1012 ProSiteProfiles Zinc finger SBP-type profile. 151 228 IPR004333 GO:0003677
Bisa03g1140 1012 FunFam Squamosa promoter-binding-like protein 14 145 215 - -
Bisa03g1140 1012 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 81 897 IPR044817 GO:0003677
Bisa03g1140 1012 MobiDBLite consensus disorder prediction 218 240 - -
Bisa03g1140 1012 SUPERFAMILY SBT domain 152 232 IPR036893 GO:0003677|GO:0005634
Bisa03g1140 1012 Gene3D - 723 902 IPR036770 -
Bisa03g1140 1012 MobiDBLite consensus disorder prediction 423 456 - -
Bisa03g1140 1012 Gene3D - 145 215 IPR036893 GO:0003677|GO:0005634
Bisa03g1140 1012 Pfam SBP domain 154 227 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1140 Bisa-ChrBisa03 15495050 15503571 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1140 24 1012 SBP-box Gene Family AT3G60030 55.666 0.0 970
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Bisa03g1140 SBP 1.8e-29 No_clan