Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1139 ATGGGGAGCGAGAATGGGAAGGAAGAGGCAAGCACGTCAAATAATGAAGCAGAGGGAGAAAAGAGCAAGCAAACAGAGAAAGCCGAGACAGTTCCTTATTACAAGTTGTTCACATTCGCCGACTCTGCTGATGTATTGTTAATGGTGGTTGGCACCATTGGAGCCATCGGAAATGGCCTGGCAATGCCTCTCATGACGTTGCTCTTCGGCCAAATGATTAACTCTTTCGGTACTAACCAGAACAGCTCCGACATCGTTGAGCAAATTTCTAAGGTGTCTCTGAAGTTTGTATACTTGGCGATAGGGTCTGGGATAGCAGCTTTTCTCCAGGTGGCTTGCTGGATGGTGACAGGGGAGAGACAGGCTGCGAGAATAAGGGGTTTGTATTTGAAAACAATACTAAGACAAGATGTGGCTTTCTTTGATAAGGAAACAAACACCGGAGAGGTGGTAGGGAGGATGTCAGGTGACACTGTTCTTATACAGGACGCCATGGGTGAGAAGGTTGGGAAATTTCTGCAACTAATATCATCATTCATTGGCGGCTTCGTAATTGCTTTTGTCAAAGGGTGGCTTCTTAGTCTTGTCATGTTATCCACTCTTCCACTTCTTGTGGTGTCTGGTGCGGCCATGGCCTTAATTATAGGCAGGATGGCATCCCAAGGTCAAAGTGCTTATGGAAAAGCGGCAAATGTAGTTGAACAGACAATTGGCGCAATTAGAACTGTTGCGTCCTTCACTGGGGAAAAGCAGGCAATATCTAGTTACAGTAGATTTCTTGTAGATGCATACAAAGCAGGAGTTCATGAAGGTTTTGCAGCTGGAATGGGTCTTGGCGTGGTTTTGTTTGTTATTTTCTGTGGTTATGCTTTAGCTATATGGTATGGTGGAAAGTTGATACTGGATAAAGGATACAATGGGGGCACAGTGATTAATGTGATCTTTGCCGTCTTAACTGCTTCAATGTCTCTTGGCCAGGCAGCTCCTTGCATGAGTGCTTTTGCAGCAGGTCAAGCTGCAGCTTATAAAATGTTCCAGACTATTGAGAGAAAACCAGAGATAGATTCTTATGATCCAAAAGGGAAAGTATTAGAGGATATTCAAGGCGAAATAGAGCTCAGAGAAGTTTATTTCAGTTATCCAGCCAGACCTCAGGAGATGATTTTCAATGGGTTCTCTCTTAAAATACCCAGTGGGAACACAGCAGCTTTGGTTGGACAAAGTGGGAGTGGAAAGTCTACTGTCATCAGCTTGATAGAAAGATTCTATGATCCACAGGCAGGTGAAGTACTTATAGATGGCATAAACCTCAAAGAACTTCAACTCAGATGGATTAGAGGAAAAATTGGGCTTGTTAGTCAGGAGCCTGTGCTTTTTGCATCTAGCATTAAGGATAACATTGCTTATGGAAAGGAGGGAGCAACAACTGAAGAGATAAAAGTTGCAGCTGAACTTGCAAATGCTGCTAAATTCGTCGATAAACTGCCACAGGGATTGGACACAATGGTTGGTGATCATGGAACTCAGTTGTCTGGTGGACAGAAGCAGCGTATTGCCATTGCAAGAGCAATTCTGAAAGATCCAAGAATTCTGCTTCTAGATGAAGCTACAAGTGCACTTGATGCAGAGTCTGAAAGGATAGTGCAAGAGGCTTTAGACAGGATCATGGTCAACCGAACTACTGTTATTGTAGCACATCGCTTGAGCACAGTGAGGAATGCTGATATGATAGCTGTGATTCACAGAGGGAAGATGGTTGAGAAAGGAACACACACAGAACTACTCAAAGATCCTGAGGGAGCATACTCTCAACTTATACGCCTACAGGAAGCAAACAAAGAGCCAGAAGACACTGAAGATCATCAAAACAGAAGTGAACTTTCTTCAGAGTCCTTAAAGCATTCCAGTCATATAAAGTCACTGGGAAGATCCATAAGTCGAGGATCATCGGTAGGAAACAGCAGCCGCCACTCATTTTCAGTGGCATTTGGATTACCCACTGGAGTTAACATCGCTGATCCCGACCTCGAAAAACCACAAACAAAAGAACAATCACCAAAGGTTCCACTCCGCCGCCTTGCTTACCTCAACAAGCCAGAGATTCCAGTGCTTCTGCTTGGAAGTGTGGGTGCCATTGTAAACGGTGCCGTACTTCCTATCTTCGGTATTCTGATTTCCAGTGCGATCAAAGCGTTCTATGAGCCACCTCATGAGTTGAGGAAGGATTCCAAGTTCTGGGCATTGATGTTCATGACACTTGGTATTGTATCCCTGCTGGCAATCCCAGCACGAGGGTACTTTTTTTCTGTGGCTGGATCTAAGTTAATCCAACGCATCAGGCTGATGTGCTTCGAGAAGGTAGTGAACATGGAGGTGGGTTGGTTTGATGATCCTGAGCATTCAAGTGGTGTAATTGGAGCAAGACTCTCAGCAGATGCAGCCACTGTACGTGCCCTTGTCGGGGATGCCCTTGGACAAGTGGTCGAGAATATAGCTTCATTATTAGCAGGAGTCCTAATTGCTTTCATTGCATCCTGGCAATTGGCATTTATCATTCTTGTATTGCTTCCCTTGATTGGATTAAACGGATATGTTCAAATGAAGTTCATGAAAGGATTCTCTGCAGATGCAAAGATGATGTACGAGGAAGCGAGTCAAGTTGCTAATGATGCGGTGGGAAGTATAAGAACAGTGGCTTCGTTCTGCGCTGAAGAGAAGGTGATGGAACTATACAGGAAGAAGTGTGAAGGACCTATGAAAACAGGGATTCAACAGGGCTTGATCAGTGGGACAGGATTCGGCGTGTCGTTTTTCTTACTGTTTTGCGTCTATGCGCTTAGTTTCTACGCAGGAGCTAAACTTGTGGAAGATGGCAAAGCCACATTCTCAGATGTTTTCCGAGTTTTCTTTGCTTTGACTATGGCAGCTTTGGCAGTTTCCCAATCAAGCTCCTTCGCTCCTGATTCTACCAAAGCCAAGTCAGCTGCAGCTTCCATATTTGGAATAATTGATAGGAAATCGATGATAGACCCAAGTGATGAGTCAGGTACTACAATGGAGAGCGTGAAGGGAGAAATTGAACTTCGACATGTAAGCTTTAAGTATCCATCTAGACCAGACATTCAGATTTTCCGAGACCTTAGCTTGACTATACATTCCGGCAAGACAGTGGCCCTTGTTGGTGAAAGTGGAAGTGGGAAATCCACAGTGATTTCGTTATTACAGAGATTCTACGATCCAGTTTCAGGTGTAATTACACTTGACGGAATAGAGATTCAAAGGTTACAACTCAAGTGGTTAAGACAACAAATGGGACTTGTGAGCCAAGAACCAATATTGTTCAATGACACTATTCGTGACAATATTGCCTATGGAAAGGAAGGCAACGCAACTGAAGCAGAAATCATAGCAGCAGCTGAACTAGCCAATGCCCACGGGTTCATTAGTGGCTTGCAACAGGGTTATAAGACAGTAGTGGGAGAGAGAGGAATCCAATTATCTGGAGGACAGAAGCAAAGGGTGGCTATTGCTCGTGCTATAATGAAGAGTCCAAAGGTTTTGCTTCTAGATGAGGCCACAAGTGCATTAGACGCAGAGTCAGAGAGAGTTGTTCAAGATGCATTGGACAGAGTGATGGTGAACAGAACCACTGTGGTTGTAGCACATCGTCTATCCACTATAAAGAATGCTGATGTTATTGCTGTGGTTAAAAATGGGGTTATAGTAGAGAAAGGAAGGCACGACACTTTGATTAACATCAAGGATGGGTTTTATGCTTCTTTAGTCCAACTTCATGCAACTGCTTCCACTGCATGA 3816 0.4416 MGSENGKEEASTSNNEAEGEKSKQTEKAETVPYYKLFTFADSADVLLMVVGTIGAIGNGLAMPLMTLLFGQMINSFGTNQNSSDIVEQISKVSLKFVYLAIGSGIAAFLQVACWMVTGERQAARIRGLYLKTILRQDVAFFDKETNTGEVVGRMSGDTVLIQDAMGEKVGKFLQLISSFIGGFVIAFVKGWLLSLVMLSTLPLLVVSGAAMALIIGRMASQGQSAYGKAANVVEQTIGAIRTVASFTGEKQAISSYSRFLVDAYKAGVHEGFAAGMGLGVVLFVIFCGYALAIWYGGKLILDKGYNGGTVINVIFAVLTASMSLGQAAPCMSAFAAGQAAAYKMFQTIERKPEIDSYDPKGKVLEDIQGEIELREVYFSYPARPQEMIFNGFSLKIPSGNTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGINLKELQLRWIRGKIGLVSQEPVLFASSIKDNIAYGKEGATTEEIKVAAELANAAKFVDKLPQGLDTMVGDHGTQLSGGQKQRIAIARAILKDPRILLLDEATSALDAESERIVQEALDRIMVNRTTVIVAHRLSTVRNADMIAVIHRGKMVEKGTHTELLKDPEGAYSQLIRLQEANKEPEDTEDHQNRSELSSESLKHSSHIKSLGRSISRGSSVGNSSRHSFSVAFGLPTGVNIADPDLEKPQTKEQSPKVPLRRLAYLNKPEIPVLLLGSVGAIVNGAVLPIFGILISSAIKAFYEPPHELRKDSKFWALMFMTLGIVSLLAIPARGYFFSVAGSKLIQRIRLMCFEKVVNMEVGWFDDPEHSSGVIGARLSADAATVRALVGDALGQVVENIASLLAGVLIAFIASWQLAFIILVLLPLIGLNGYVQMKFMKGFSADAKMMYEEASQVANDAVGSIRTVASFCAEEKVMELYRKKCEGPMKTGIQQGLISGTGFGVSFFLLFCVYALSFYAGAKLVEDGKATFSDVFRVFFALTMAALAVSQSSSFAPDSTKAKSAAASIFGIIDRKSMIDPSDESGTTMESVKGEIELRHVSFKYPSRPDIQIFRDLSLTIHSGKTVALVGESGSGKSTVISLLQRFYDPVSGVITLDGIEIQRLQLKWLRQQMGLVSQEPILFNDTIRDNIAYGKEGNATEAEIIAAAELANAHGFISGLQQGYKTVVGERGIQLSGGQKQRVAIARAIMKSPKVLLLDEATSALDAESERVVQDALDRVMVNRTTVVVAHRLSTIKNADVIAVVKNGVIVEKGRHDTLINIKDGFYASLVQLHATASTA 1271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1139 1271 Gene3D - 1016 1270 IPR027417 -
Bisa03g1139 1271 CDD ABC_6TM_Pgp_ABCB1_D2_like 694 1009 - -
Bisa03g1139 1271 MobiDBLite consensus disorder prediction 612 653 - -
Bisa03g1139 1271 SUPERFAMILY ABC transporter transmembrane region 35 355 IPR036640 GO:0005524|GO:0016020
Bisa03g1139 1271 ProSitePatterns ABC transporters family signature. 1166 1180 IPR017871 GO:0005524|GO:0016887
Bisa03g1139 1271 SMART AAA_5 398 590 IPR003593 GO:0016887
Bisa03g1139 1271 SMART AAA_5 1053 1246 IPR003593 GO:0016887
Bisa03g1139 1271 CDD ABC_MTABC3_MDL1_MDL2 1026 1264 - -
Bisa03g1139 1271 Pfam ABC transporter 1045 1194 IPR003439 GO:0005524
Bisa03g1139 1271 PANTHER ABC TRANSPORTER B FAMILY 9 611 IPR039421 -
Bisa03g1139 1271 MobiDBLite consensus disorder prediction 11 25 - -
Bisa03g1139 1271 Coils Coil 7 27 - -
Bisa03g1139 1271 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1016 1264 IPR027417 -
Bisa03g1139 1271 Gene3D - 369 626 IPR027417 -
Bisa03g1139 1271 SUPERFAMILY ABC transporter transmembrane region 686 1010 IPR036640 GO:0005524|GO:0016020
Bisa03g1139 1271 CDD ABC_6TM_Pgp_ABCB1_D1_like 48 332 - -
Bisa03g1139 1271 MobiDBLite consensus disorder prediction 638 653 - -
Bisa03g1139 1271 Gene3D ABC transporter type 1, transmembrane domain 94 1000 IPR036640 GO:0005524|GO:0016020
Bisa03g1139 1271 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 371 607 IPR003439 GO:0005524
Bisa03g1139 1271 FunFam ABC transporter B family member 1 1016 1266 - -
Bisa03g1139 1271 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 49 336 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa03g1139 1271 CDD ABC_MTABC3_MDL1_MDL2 371 609 - -
Bisa03g1139 1271 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1026 1263 IPR003439 GO:0005524
Bisa03g1139 1271 MobiDBLite consensus disorder prediction 612 637 - -
Bisa03g1139 1271 FunFam ABC transporter B family member 1 361 610 - -
Bisa03g1139 1271 FunFam ABC transporter B family member 9 993 1015 - -
Bisa03g1139 1271 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 361 609 IPR027417 -
Bisa03g1139 1271 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 705 991 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa03g1139 1271 ProSitePatterns ABC transporters family signature. 510 524 IPR017871 GO:0005524|GO:0016887
Bisa03g1139 1271 MobiDBLite consensus disorder prediction 1 25 - -
Bisa03g1139 1271 FunFam ABC transporter B family member 9 35 367 - -
Bisa03g1139 1271 FunFam ABC transporter B family member 1 684 992 - -
Bisa03g1139 1271 Pfam ABC transporter transmembrane region 49 322 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa03g1139 1271 Pfam ABC transporter transmembrane region 705 976 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa03g1139 1271 Pfam ABC transporter 390 538 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1139 Bisa-ChrBisa03 15483259 15488257 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1139 23 1270 Calmodulin-binding Proteins AT2G36910 45.916 0.0 1097