Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1137 ATGGAGGATGAAGCTTTCCTTTCCTGCCAAACAGGGTCCCAGTTGGAACCCATCATCGTTCATCGTGTTCCTGATTTATCCTTCACTAGCTCTCGCTCCTTCACTGATTTTATCACTTTTCAGGAAGCCCAGCGAGACCCTCAATCCTCATGTCAATTATTGGCCGCAAATGCCCCGAAGAAGAAACTGAGTCGCTGCAAGACTGCCCCTGCCATGGTTGTCCTGCGAGACCTCAGACCAAAAGCACCCGATATTCCCAAACCACAATCTAGCTCCATTATCAGGCAAGGCATTTGCTTACTTGTGATATATCTTTCAATTGGGGTTGTCATATACTCCTTCAATCGGGGTCATTTTTCCGGCGCAGAGACTCACCCGGTGGTTGATGCCCTTTACTTCTGTATAGTCACCATGTGTACAATCGGTTACGGAGACATCACTCCTCTAACGCCAGTGACGAAGGTTTTTGCGTGTATCTTCGTATTGGTAGGGTTTGGATTCATAGACATATTGCTTAGTGGGCTTGTCAATTACGTCCTGGATTTGCAAGAGAACATGATTCTAAGTGGGGTTCAAATGGGTACTCAGAAATCTCCAGAACGATTCTCTGCAAGAAATTACATAGTTGATGTGGCAAAGGGGCGGATGAGAATCAGATTGAAGGTTGGTTTGGCACTTGGTGTGGTGGTGTTGTGTATTGGAATAGGGAGTTTGGTTTTGTACTTCGTGGAGGATTTGGATTGGATTGATTCAATTTACTTATCGGTAATGTCTGTAACAACAGTAGGGTATGGGGACAGAGCCTTCAAGACCCTTCCGGGGCGGCTCTTTGCAGCTATTTGGCTCCTTGTTTCCACATTGATGGTGGCTCGTGCCTTCCTGTATTTGGCTGAAGCCAGAATTGATAAAAGGCACCGGAGAGTTGCCAAGTCGGTATTGCAGAGAGATATCACTGTTGAGGATTTGCTTGCTGCAGATATCAATAACACCGGTTTCATTAGTAAGTCAGAGTATGTAATCTTCAAGCTCAAAGAGATGGGGAAGATACGGGAGAAAGATGTATTGCAAATCTGTGATCAATTCAGCAAGCTTGATCCTACCAACTCTGGGAAGATAACTCTACATCATTTCTTGGGGAGCCGGTCGTGA 1149 0.456 MEDEAFLSCQTGSQLEPIIVHRVPDLSFTSSRSFTDFITFQEAQRDPQSSCQLLAANAPKKKLSRCKTAPAMVVLRDLRPKAPDIPKPQSSSIIRQGICLLVIYLSIGVVIYSFNRGHFSGAETHPVVDALYFCIVTMCTIGYGDITPLTPVTKVFACIFVLVGFGFIDILLSGLVNYVLDLQENMILSGVQMGTQKSPERFSARNYIVDVAKGRMRIRLKVGLALGVVVLCIGIGSLVLYFVEDLDWIDSIYLSVMSVTTVGYGDRAFKTLPGRLFAAIWLLVSTLMVARAFLYLAEARIDKRHRRVAKSVLQRDITVEDLLAADINNTGFISKSEYVIFKLKEMGKIREKDVLQICDQFSKLDPTNSGKITLHHFLGSRS 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1137 382 Gene3D - 204 303 - -
Bisa03g1137 382 SUPERFAMILY Voltage-gated potassium channels 89 179 - -
Bisa03g1137 382 SUPERFAMILY Voltage-gated potassium channels 212 321 - -
Bisa03g1137 382 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 127 355 IPR003280 GO:0005267|GO:0016020|GO:0071805
Bisa03g1137 382 ProSitePatterns EF-hand calcium-binding domain. 326 338 IPR018247 -
Bisa03g1137 382 Gene3D - 304 381 - -
Bisa03g1137 382 PRINTS Two pore domain K+ channel signature 136 164 IPR003280 GO:0005267|GO:0016020|GO:0071805
Bisa03g1137 382 PRINTS Two pore domain K+ channel signature 260 269 IPR003280 GO:0005267|GO:0016020|GO:0071805
Bisa03g1137 382 FunFam Two-pore potassium channel 3 205 319 - -
Bisa03g1137 382 SUPERFAMILY EF-hand 324 377 IPR011992 -
Bisa03g1137 382 FunFam Two-pore potassium channel 5 82 192 - -
Bisa03g1137 382 Gene3D - 78 200 - -
Bisa03g1137 382 Pfam Ion channel 230 298 IPR013099 -
Bisa03g1137 382 Pfam Ion channel 100 179 IPR013099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1137 Bisa-ChrBisa03 15422929 15424710 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1137 41 379 Ion Channels AT4G01840 66.279 3.84e-162 459