Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1135 ATGGCCGGAGATGTGAGCGGAACCAACCACAATATCACCGTTTCTGCGCCGGTGGCGGACGGTAGCGGAAGAGCGGAGCCGCAATACGCGTTGGCGAAGATCTCAGTATGGTGGGACATAGAGAATTGCCAGGTTCCAAAGGGTTGTGACCCACATGCCATCGCCCAGAATATTACTCGGGCACTCGTCAAGATGAACTATTGTGGCCCCGTCAACATCTCCGCCTACTGCGACACCAATCGCATCCCATCTTCTGTTCAAAAGGCACTTTCTAGCACCGGCATTTCCCTCAACCACGTTCCAGCCGGTGTGAAAGATGCTAGTGATAAGAAAATTCTAGTTGATATGTTGTTCTGGGCAGTAGACAACCCTGCTCCTGCAAATTATTTGCTGATTTCTGGGGATGGGGATTTCTCAAATGCTCTACATCAGTTGCGCATGAGAAGATACAACATTCTTCTGGCACAACCAGTAAAAGCATCAGCTCCCCTTGTTGCAGCCGCAAAAAGTGTATGGCTCTGGACGAGCCTTTTATCTGGTGGAGCCCCACAATCAAGTGTCGAATCATCCATTGCTAGTAATAGCCGAGTCTCTTATTCTGCGAGGGTGCAAAACCCTATTGCTGACGCAAATCAATTAAATCAGCTAATGATTTTCAATTCTGAAGACCTTCCTATGGAAAGTCAAAAGACCTATACTATTGGAAGGGTTAGTGATTTGAAACACAAGAAAAAATATGGTTTGAAAACTGAAAACCAGCCCTACATATCAAGACCTCCGAGTTTGCCCCTTACAGTTCCAGAGTGTACGAATAATGATCCACTTAAACCTGCACAGTCACAGATGAAGCTATTTCGGAAAGCCCCGCATGAATTCTTCTGTAGCAGTGAGCCAGTAGTCCCAACTAGTTGGTTGACTCCTAATCTTCAAAGCAACCAAGACTTATTAGGATCTAGTATGCACAACTCTGATGAAGTTCAAGTTCCTCTTCCTCAAGATCTCAATCGTAGGTTTTTTAGGTCAGATGATCTCCATATGCAATCTATGTCTGGACTAGAAAATTTGCCTCTTCCTGCTTCTCATACTTGTAAATTTCAGCCAATGCCTCTTTACTTCGATGGATCTAAATTGTCTGCAGGTCCAAGTTCCATTCCTGATATAGATAAGCTACACATTTTTCAATATTCAAACAATGTTAAAAGTACTCCAATTTGCCATCAGCAAACCAGTAAATATTCTAACCCAAGCACTACTCAGTCTCCTAACCTACCTAGCTTACAAGCATCATCAACAGGCCAAAACAAGCACGGTGCTCAAGCATTTCATTATGAGAATTTGAACCAAAGGCATCCTCGTAGTTATGAACATATGCTTTCTTCGTCCTCCTCTGGAATTTCCACCAATTGTGACGCCAATTGTAATAATGTCAGGGGAGTTCAGGGATGTCAACCACCTTCTAAGTATGCGCAAGGCCTTATTGGTGTTATTCTACTAGCCTTAGACACTCTGAAAGTTGAAAAGGTCATGCCTACTGAAGCAAATATAATTAATTGCATTTTTTATGGAGATCCCAAATATCGGACTACTGATGCCAAGAAGGCCTTAGATTGTGCAATAAAGCATTGTATGGTAACAAAACAAAGCCTAGGTGCACTACAGTTTTATGTTGGTAGAAACGAGAAACTATGGAAGTGTGTGAACCTTATAGGTAATCCTAATCAGTACCCAAAAACAACATGGGATGGAATAGAAAGATTCCTTACTTCATCATCTGGACGGACAGCAATTTTGGCTTCTCGGTGCAGATATGAAGCATCTTTAATTCTAAGGAAAGAATGCCTTAAAGAGCTTATGTTAGGTGATGTACTTCAGATCTTGAATATGATTATCACTGTCAAGAAATGGATTATACATCATCAGTCTGGATGGCAGCCAATTACTATTACGCTTACAGAGACCAGAAATGATGCAGGGAGTGGTTCCGGTGTTTAA 1992 0.4247 MAGDVSGTNHNITVSAPVADGSGRAEPQYALAKISVWWDIENCQVPKGCDPHAIAQNITRALVKMNYCGPVNISAYCDTNRIPSSVQKALSSTGISLNHVPAGVKDASDKKILVDMLFWAVDNPAPANYLLISGDGDFSNALHQLRMRRYNILLAQPVKASAPLVAAAKSVWLWTSLLSGGAPQSSVESSIASNSRVSYSARVQNPIADANQLNQLMIFNSEDLPMESQKTYTIGRVSDLKHKKKYGLKTENQPYISRPPSLPLTVPECTNNDPLKPAQSQMKLFRKAPHEFFCSSEPVVPTSWLTPNLQSNQDLLGSSMHNSDEVQVPLPQDLNRRFFRSDDLHMQSMSGLENLPLPASHTCKFQPMPLYFDGSKLSAGPSSIPDIDKLHIFQYSNNVKSTPICHQQTSKYSNPSTTQSPNLPSLQASSTGQNKHGAQAFHYENLNQRHPRSYEHMLSSSSSGISTNCDANCNNVRGVQGCQPPSKYAQGLIGVILLALDTLKVEKVMPTEANIINCIFYGDPKYRTTDAKKALDCAIKHCMVTKQSLGALQFYVGRNEKLWKCVNLIGNPNQYPKTTWDGIERFLTSSSGRTAILASRCRYEASLILRKECLKELMLGDVLQILNMIITVKKWIIHHQSGWQPITITLTETRNDAGSGSGV 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1135 663 Pfam OST-HTH Associated domain 599 653 IPR025677 -
Bisa03g1135 663 Gene3D - 30 176 - -
Bisa03g1135 663 Pfam NYN domain 33 169 IPR021139 GO:0004540
Bisa03g1135 663 PANTHER LIMKAIN B LKAP 22 547 IPR024768 GO:0005777|GO:0010468
Bisa03g1135 663 CDD PIN_limkain_b1_N_like 33 157 - -
Bisa03g1135 663 MobiDBLite consensus disorder prediction 406 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1135 Bisa-ChrBisa03 15404424 15407069 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1135 25 215 C2H2 Transcription Factor Family AT5G61190 68.557 9.62e-81 275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g1135 03 15404424 15407069 Bisa03g1135 03 15404424 15407069 ECH