Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1132 ATGGAAACTAGATTTGGCGCGGAAGCTTTTCATTTGTATGGTATGGGTTCCTCGGATTTGCGGGCCGTGGGTAAGAGGTCCGTGGAATGGGATTTGAACGATTGGAAATGGGATGGGGATCTTTTTATAGCTAGTCCGCTGACTCCGGTGCCAGCAGATAGCGCAGGCCGACAATTTTTGCCTCTTGAGTCTGGGATCCCTGTGGCCGGAGGGTCCTCCAACAGTTCTTCCTCATGCTCAGATGAAGTAAATCTTGGGATTGACAAGAGGAAGAAGGAAGGAGATAGGAAAAGAAGGGTTATTGTGGTTGAGGATGATAGTTTGAATGAGGAAGCAGGTAGCCTTAGCCTAAAGCTTGGTGGACATGATTCTCCAATTGTTGATAGGGAGATAGCAAGTTGGGAAGGAACGAATGGGAAAAAAACCAGATTAGCTGGAGGTACTTCAAATCGAGCTGTTTGTCAGGTGGAAGACTGTGGTGCAGATCTGAGCACTGCTAAGGATTATCACAGACGTCATAAAGTTTGCGAGATGCACTCAAAGGCCAGCAGGGCACTTGTGGGGAATGTAATGCAGCGGTTCTGTCAGCAATGTAGTAGGTTTCACGTACTTCAGGAGTTTGATGAGGGAAAGAGAAGCTGTCGACGACGCTTGGCTGGCCATAATAAAAGGAGGCGGAAAACAAATAATGATGCTGTTCCAAATGGAAGTCCACTAAATGATGATCAGACTAGTAGTTATCTGTTGATTAGTTTATTGAAGATACTTACAAATATGCATTCTAACAGGTCAAATCAGACCACAAATCAAGATCTGCTGTCTCATCTTCTAAGGAGCCTAGCCAGTCAAAATGATGAACAGAGGAGCAAGAACTTGTCTAACCTTTTGCGGGAACCAGAGAACTTAGTGAAAGAAGGAAGTTCTCCTGGGAAGCTGGATTTGGTTTCTACTTTATTCTCAAATGGTTCTCAAGGCTCTCCAACTGTTATAAGACAACCACAGACAACATCTCTAACTGAAATTCAACATCAAGGGATGCATGATGCAAGGGCAAGGGCTGCTGATCAACAAACTATGTCTTCTACTAAGCCTAGCATTTCAAACAGTCCTCCAGCTCACTCAGAAGCCCGAGACAGTGTTGCTGGACAGGTCAAGATGAATAATTTTGATTTGAATGACATATATATTGACTCAGATGATGGTGTAGAAGATATAGAAAGATTGCCCGTCTCTGCAAATCTTGGGGCTAGTTCTCTTGATTATCCATGGGCACAAGACTCTCATCAGTCAAGTCCACCTCAAACAAGTGGAAATTCAGATTCTGCATCTGCCCAATCCCCTTCTAGTTCAAGTGGAGAAGCTCAGAGCCGCACAGATCGGATTGTTTTTAAACTCTTTGGTAAAGAACCAAATGATTTTCCTCTTGTACTTAGACCACAGATTCTTGACTGGTTGTCCCACAGTCCTACTGACATTGAGAGCTACATACGACCTGGATGTATCGTCTTGACTATTTATCTTCGTCAGGCTGAAGCTGTGTGGGAGGAGCTGTGCTATGATCTGACTTCAAGTTTGAATAGGCTTCTGGATGTCTCAGATGGCGCTTTTTGGAGAAGTGGATGGGTTTACACAAGGGTGCAGCATCAGATAGCCTTCATTTTCGATGGTCAGGTTGTCATAGATACATCCTTACCTCTCAGAAGTAACAATTATAGTAAGATTTTAAGTGTTAGTCCAATTGCTGTACCGGCATTCAAAAGAGCTCAATTTTCAGTCAAGGGTATTAATCTGGTTCGCCCGGCCACTAGGTTATTATGTGCATTAGAAGGCAAATATCTGGCCTGTGAAGATGCTCATGAGCCAATGGAGCGGTACTCCAATGAACTTGATGAATTTGATGAGCTCCAGTGCGTCCAATTTTCATGTTCTGTCCCTGTGATGAGTGGAAGGGGATTTATTGAGATTGAGGACCAGGGCTTGAGCAGCAGCTTTTTTCCATTCATAGTTACGGAGGAGGATGTTTGCTCAGAAATCTGTGCTCTTGAGCCTCTACTAGAATCAAGCAAAGCTGATTCCGATATTGTAGGATCTGGAAAAAGTATAGCAAGAAGTCAGGCCATGGATTTTATTCATGAAATGGGTTGGCTTCTCCACAGAAGCCAGTTGAAATCTAGGCTGGTTCACCTAAACTCCGGTGCAGATCTTTTTCCATTAAAACGGTTCAAGTGGCTCATGGAGTACTCTATGGACCATGATTGGTGTGCGGTGGTGAAGAAACTACTGAACCTAGTACTTGACGGAACTGTGGATACAGGAGATCACCCTTCAAAGTATTTTGCACTTTCAGAGATGGGTCTCCTTCATAAAGCTGTTAGGAGAAATAGCAAGCGACTAGTGGAGTTGCTTTTGAGATATGTCCCTGAGAATATTTCTGATAAACTGGTGCCTGAAAACCGGGCATTGGTTGATGTTGGGAACCAGAGCTTCTTGTTTAGACCTGACATTGTTGGTCCTGCTGGCTTGACACCACTGCACATTGCAGCTGGAAAAGATGGTTCTGAGGATGTGTTGGATGCTTTAACTGATGATCCTTGCAGGGTGGGAATTGAAGCGTGGAAGAGTGCCCGTGACAGCACAGGCTCCACACCTGAAGATTATGCCCGCTTACGGGGCCATTATGCTTATATTCACCTGGTGCAAAAGAAAATCAACAAGAGACAAGCAGCAGCAGCTCCTCACGTGTTGGTAGATATCCCTAGCAATCTGACAGAGTGCAGTACAAAGCAGAAGCAAACCGAGTCATCCACTACCTTTGAGATCGGAAAAGCTGAAGGAAGCCGTGGGCAAGGGCACTGCAAGCTTTGTGACTTTAAATTGTCTTGTAGAACTGCAGTTGGAAGGTCTTTGGTGTACAAACCTGCCATGCTATCAATGGTGGCCGTAGCAGCAGTGTGTGTCTGCGTGGCCCTTCTCTTTAAGAGCTCACCTGAAGTTCTGTATGTGTTCCAACCCTTCAGGTGGGAATCGTTGGATTTCGGAACAAGCTGA 3048 0.4485 METRFGAEAFHLYGMGSSDLRAVGKRSVEWDLNDWKWDGDLFIASPLTPVPADSAGRQFLPLESGIPVAGGSSNSSSSCSDEVNLGIDKRKKEGDRKRRVIVVEDDSLNEEAGSLSLKLGGHDSPIVDREIASWEGTNGKKTRLAGGTSNRAVCQVEDCGADLSTAKDYHRRHKVCEMHSKASRALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTNNDAVPNGSPLNDDQTSSYLLISLLKILTNMHSNRSNQTTNQDLLSHLLRSLASQNDEQRSKNLSNLLREPENLVKEGSSPGKLDLVSTLFSNGSQGSPTVIRQPQTTSLTEIQHQGMHDARARAADQQTMSSTKPSISNSPPAHSEARDSVAGQVKMNNFDLNDIYIDSDDGVEDIERLPVSANLGASSLDYPWAQDSHQSSPPQTSGNSDSASAQSPSSSSGEAQSRTDRIVFKLFGKEPNDFPLVLRPQILDWLSHSPTDIESYIRPGCIVLTIYLRQAEAVWEELCYDLTSSLNRLLDVSDGAFWRSGWVYTRVQHQIAFIFDGQVVIDTSLPLRSNNYSKILSVSPIAVPAFKRAQFSVKGINLVRPATRLLCALEGKYLACEDAHEPMERYSNELDEFDELQCVQFSCSVPVMSGRGFIEIEDQGLSSSFFPFIVTEEDVCSEICALEPLLESSKADSDIVGSGKSIARSQAMDFIHEMGWLLHRSQLKSRLVHLNSGADLFPLKRFKWLMEYSMDHDWCAVVKKLLNLVLDGTVDTGDHPSKYFALSEMGLLHKAVRRNSKRLVELLLRYVPENISDKLVPENRALVDVGNQSFLFRPDIVGPAGLTPLHIAAGKDGSEDVLDALTDDPCRVGIEAWKSARDSTGSTPEDYARLRGHYAYIHLVQKKINKRQAAAAPHVLVDIPSNLTECSTKQKQTESSTTFEIGKAEGSRGQGHCKLCDFKLSCRTAVGRSLVYKPAMLSMVAVAAVCVCVALLFKSSPEVLYVFQPFRWESLDFGTS 1015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1132 1015 FunFam Squamosa promoter-binding-like protein 14 145 215 - -
Bisa03g1132 1015 Gene3D - 719 905 IPR036770 -
Bisa03g1132 1015 MobiDBLite consensus disorder prediction 421 456 - -
Bisa03g1132 1015 MobiDBLite consensus disorder prediction 284 309 - -
Bisa03g1132 1015 SUPERFAMILY Ankyrin repeat 783 898 IPR036770 -
Bisa03g1132 1015 MobiDBLite consensus disorder prediction 354 374 - -
Bisa03g1132 1015 Gene3D - 145 215 IPR036893 GO:0003677|GO:0005634
Bisa03g1132 1015 SMART ANK_2a 782 812 IPR002110 GO:0005515
Bisa03g1132 1015 SMART ANK_2a 839 869 IPR002110 GO:0005515
Bisa03g1132 1015 MobiDBLite consensus disorder prediction 218 240 - -
Bisa03g1132 1015 MobiDBLite consensus disorder prediction 343 378 - -
Bisa03g1132 1015 SUPERFAMILY SBT domain 152 232 IPR036893 GO:0003677|GO:0005634
Bisa03g1132 1015 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 81 900 IPR044817 GO:0003677
Bisa03g1132 1015 Pfam SBP domain 154 227 IPR004333 GO:0003677
Bisa03g1132 1015 ProSiteProfiles Zinc finger SBP-type profile. 151 228 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1132 Bisa-ChrBisa03 15364735 15373162 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1132 24 1015 SBP-box Gene Family AT3G60030 56.802 0.0 985
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Bisa03g1132 SBP 1.5e-29 No_clan