Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1126 ATGCAGATCTTCGTGAAAACCCTTACGGGGAAGACGATAACCTTAGAGGTTGAATCCTCGGGTACAATTGACAATGTGAAGGCCAAGATTAAAGACAAAGAAGGCATCCCTCCTGATCAACAACGCCTCATCTTCGCCGGCGAGCAACTTGAAGATGGCCGAACCCTTGCTGATTACAACATTCAGAAAGAGTCCACCCTCCACCTCGTTCTTCTCTCCGTGGCGGCGCCAAGAAGCTTCTACAAGGTCGATGATTCTGGCAAGGTCCAGAGGTTGAGGAAGGAGTGCCCCAATGCGAAGTGTGGCGCTGGAACCTTCATGGCCAATCACTTTGACAGGCACTACTGTGGTAAGTGTGGCCTCACCTATGTTTATCAGAAAGCCGGTGGTGACTGA 396 0.5076 MQIFVKTLTGKTITLEVESSGTIDNVKAKIKDKEGIPPDQQRLIFAGEQLEDGRTLADYNIQKESTLHLVLLSVAAPRSFYKVDDSGKVQRLRKECPNAKCGAGTFMANHFDRHYCGKCGLTYVYQKAGGD 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1126 131 FunFam Polyubiquitin 1 70 - -
Bisa03g1126 131 ProSiteProfiles Ubiquitin domain profile. 1 71 IPR000626 GO:0005515
Bisa03g1126 131 SMART ubq_7 1 72 IPR000626 GO:0005515
Bisa03g1126 131 PRINTS Ubiquitin signature 32 52 IPR019956 -
Bisa03g1126 131 PRINTS Ubiquitin signature 53 74 IPR019956 -
Bisa03g1126 131 PRINTS Ubiquitin signature 11 31 IPR019956 -
Bisa03g1126 131 CDD Ubl_ubiquitin 1 71 - -
Bisa03g1126 131 Gene3D - 73 126 IPR038582 -
Bisa03g1126 131 SMART Ribosomal_S27_2 77 122 IPR002906 GO:0003735|GO:0005840|GO:0006412
Bisa03g1126 131 SUPERFAMILY Ubiquitin-like 1 71 IPR029071 -
Bisa03g1126 131 SUPERFAMILY Zn-binding ribosomal proteins 78 128 IPR011332 GO:0006412
Bisa03g1126 131 Pfam Ubiquitin family 3 71 IPR000626 GO:0005515
Bisa03g1126 131 Gene3D - 1 72 - -
Bisa03g1126 131 ProSitePatterns Ubiquitin domain signature. 27 52 IPR019954 -
Bisa03g1126 131 Pfam Ribosomal protein S27a 79 122 IPR002906 GO:0003735|GO:0005840|GO:0006412
Bisa03g1126 131 PANTHER UBIQUITIN 1 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1126 Bisa-ChrBisa03 15322618 15323087 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1126 1 129 Cytoplasmic Ribosomal Protein Gene Family AT3G62250 74.026 3.04e-77 224