Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1109 ATGAAAGGCCGATCGATAGCAAATCAAAGTGAAGACGAGATGAGCATAAGGAAAGGTCCGTGGACCGTTGAAGAAGACGCCATTCTCACCAATTACATAGCCACCCACGGTGAAGGTCGCTGGAATTCCGTCGCCCGCTCTGCAGGTCTTAGGAGAACGGGAAAAAGTTGCAGATTAAGATGGCTAAACTACTTGCGTCCTGATGTTCGGCGAGGAAATATCACGCTTCAAGAACAGTTATTGATTCTTGATCTCCATTCTCGGTGGGGAAACAGGTGGTCTAAAATTGCGCAGCAGTTGCCAGGAAGAACAGACAATGAGATAAAGAATTATTGGAGAACGAGAGTGATAAAGCAGGCGAAGCAGCTCAAGTGTGACGTGAACAGCAAGGAGTTCAGAGACGCCATGCGTTACGTGTGGATGCCCCGCCTGCTGGAGCGGATCCATCAGCCTCAGAAACAGGTAGACCCAAGTGGCCTCCTTCACCAACAGGGTTCAGAAACAGAGTGGGTGAACCCAAACTACTCCTCCAGCGCCTCCTATTCAGCCACGGAGCACAGCGAATCCTCGGATATAGCGGGTCATCCGGAAGGAAACGGGTCGGATACCCGGATGTCAGAGCAGGGAAATGTAATAGCTTGTGGGGAGTCGATGGAGAATCTATGGAACGACGAGAACATATGGTTTTTACGACAACAACTCATCGATGAAATCTAA 717 0.4965 MKGRSIANQSEDEMSIRKGPWTVEEDAILTNYIATHGEGRWNSVARSAGLRRTGKSCRLRWLNYLRPDVRRGNITLQEQLLILDLHSRWGNRWSKIAQQLPGRTDNEIKNYWRTRVIKQAKQLKCDVNSKEFRDAMRYVWMPRLLERIHQPQKQVDPSGLLHQQGSETEWVNPNYSSSASYSATEHSESSDIAGHPEGNGSDTRMSEQGNVIACGESMENLWNDENIWFLRQQLIDEI 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1109 238 FunFam MYB transcription factor 75 138 - -
Bisa03g1109 238 CDD SANT 20 65 IPR001005 -
Bisa03g1109 238 Pfam Myb-like DNA-binding domain 18 65 IPR001005 -
Bisa03g1109 238 Pfam Myb-like DNA-binding domain 71 114 IPR001005 -
Bisa03g1109 238 FunFam Myb transcription factor 18 70 - -
Bisa03g1109 238 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 13 195 IPR044676 GO:0003700|GO:0006355|GO:0043565
Bisa03g1109 238 SMART sant 17 67 IPR001005 -
Bisa03g1109 238 SMART sant 70 118 IPR001005 -
Bisa03g1109 238 MobiDBLite consensus disorder prediction 172 189 - -
Bisa03g1109 238 ProSiteProfiles Myb-like domain profile. 66 116 IPR001005 -
Bisa03g1109 238 Gene3D - 75 116 - -
Bisa03g1109 238 Gene3D - 18 70 - -
Bisa03g1109 238 ProSiteProfiles Myb-like domain profile. 13 65 IPR001005 -
Bisa03g1109 238 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 13 69 IPR017930 -
Bisa03g1109 238 SUPERFAMILY Homeodomain-like 15 112 IPR009057 -
Bisa03g1109 238 CDD SANT 75 114 IPR001005 -
Bisa03g1109 238 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 70 120 IPR017930 -
Bisa03g1109 238 MobiDBLite consensus disorder prediction 172 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1109 Bisa-ChrBisa03 15099308 15100315 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1109 11 237 MYB Transcription Factor Family AT2G47190 51.765 1.31e-80 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa03g1109 Myb_DNA-binding 1.4e-15 CL0123