Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1107 ATGACAAGTTTATCAGATTGCGGATCATCAGCGACGCATGGAAGTGGCAGCGAATTAGAAGATACAGGAATTATAAAGAAAGGTCCATGGACACAGGAAGAGGATTCTATTCTCATCAACTACATCTCCCGCCACGGCGAGGGTCACTGGAACTCCGTTGCTCGTTGTATAAAGCGAACGGGCAAAAGCTGCAGATTAAGATGGTTAAACTACTTGCGTCCAAATGTTCGACGTGGGAACATCACCCTCCGAGAACAGCTCTTAATCCTGGAACTCCATTTCCGCTGGGGAAATCGGTGGTCGAAAATAGCGCAACACTTGCCGGGCAGGACAGACAATGAGATCAAGAACTATTGGAGGACTCGCGTGGTGAAGCAGGCGAAGCAACTCAAGTGCGACGTCAACAGCAAGCAGTTCAGAGATGCCCTGCGTTTCGTATGGATGCCTCGCCTACTAGAGCGGATCCAGGCCTCCTCATCCGGGTCCGGGTATGGCCCACCCGACAGCGACCATTGTTTCATGGCGGACCCTTCGTCTCACTCTGGGCAACTTGATGATGTCCAACCCCCTTCAGCTTCGCGCTCTGACTCTGCCGTGTCTTGCAATTTATCAGAAGAAGGACACGTGGCACCTTCGGGTGTACAAGCATTTGAGACAAGCACTGGGTTTGGAGTTGCGGACTTGTGGACGGATGAAAATATATGGTTCTTGCAACAACAGCTATGTGATGACATTTGA 738 0.5068 MTSLSDCGSSATHGSGSELEDTGIIKKGPWTQEEDSILINYISRHGEGHWNSVARCIKRTGKSCRLRWLNYLRPNVRRGNITLREQLLILELHFRWGNRWSKIAQHLPGRTDNEIKNYWRTRVVKQAKQLKCDVNSKQFRDALRFVWMPRLLERIQASSSGSGYGPPDSDHCFMADPSSHSGQLDDVQPPSASRSDSAVSCNLSEEGHVAPSGVQAFETSTGFGVADLWTDENIWFLQQQLCDDI 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1107 245 CDD SANT 29 72 IPR001005 -
Bisa03g1107 245 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 22 76 IPR017930 -
Bisa03g1107 245 Gene3D - 28 77 - -
Bisa03g1107 245 MobiDBLite consensus disorder prediction 158 199 - -
Bisa03g1107 245 MobiDBLite consensus disorder prediction 1 17 - -
Bisa03g1107 245 Pfam Myb-like DNA-binding domain 30 85 - -
Bisa03g1107 245 MobiDBLite consensus disorder prediction 181 199 - -
Bisa03g1107 245 ProSiteProfiles Myb-like domain profile. 73 123 IPR001005 -
Bisa03g1107 245 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 42 51 IPR001345 GO:0003824
Bisa03g1107 245 SMART sant 26 74 IPR001005 -
Bisa03g1107 245 SMART sant 77 125 IPR001005 -
Bisa03g1107 245 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 25 185 IPR044676 GO:0003700|GO:0006355|GO:0043565
Bisa03g1107 245 SUPERFAMILY Homeodomain-like 26 119 IPR009057 -
Bisa03g1107 245 FunFam MYB transcription factor 82 145 - -
Bisa03g1107 245 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 77 127 IPR017930 -
Bisa03g1107 245 ProSiteProfiles Myb-like domain profile. 26 72 IPR001005 -
Bisa03g1107 245 Gene3D - 81 142 - -
Bisa03g1107 245 CDD SANT 82 121 IPR001005 -
Bisa03g1107 245 MobiDBLite consensus disorder prediction 1 25 - -
Bisa03g1107 245 FunFam Myb transcription factor 27 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1107 Bisa-ChrBisa03 15093506 15094466 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1107 20 244 MYB Transcription Factor Family AT2G47190 50.397 5.37e-78 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa03g1107 Myb_DNA-bind_6 6.8e-16 CL0123