Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1080 ATGGGTGTGATTGGGAGGCAGATGCCGCGATCGAATTCGGCTGTGCACAATCAGCCTCAAAACTCTGACAACTTCCTTGAGGCAACCTCTCATGGGAGATGGTCTTCCACTTTGACGCAGGAGTTTGGGTCCTTGTCCAGCTTGAGTTGGAACGATGATGATCAAGTCTTGCCCACAGGGTTAACCCATGGCCTGTTTGATCTTCGTTCCTTCGATACCGAGCTTTTACCCGAGATGTCTAGTATTCATGATGAATATTTGATCGATCAAGCGGTTTGCGGTCAAGGTTTTGATGACTCTGAGCCATTTCTTTCCACCAACAAATTGGTAAACAGCTCACATGGTTTGCCTGATAAGAATGTTCTTGGAAGTTTCTCAGCTGATAAAGACAGAACAAACAATGTTGCTAAGATCAAAGTCGTGGTACGCAAGAGACCAATAAATAAGAAAGAATTAGCAAAAAAAGAGGAAGACATTATTACTATAGATTCAAATTCTCTCACTGTTCATGAAAGAAAATTGAAGGTCGACTTAACAGAATATATTGAGAAGCATGAGTTTGTTTTTGATGCTGTGCTGAGTGAAGATGTCTCAAATGATGAATGGAAAGACTTATACTATGCAACCACTGCCTCTCAAAGCATCCAGAGATATTTTAAGATTAATGCACCATACATACCAGAACCAAGAAAACTTAGCATGAGAGAGGATGGGAAACAACAGGTTTGCATTGTTGGCTTGCAAGAATACAGAGTATCTAATGTTAAGAAAATCAAGGAATTTATTGAGAGAGGAGATGCTACAAGAAGCACTGGTACAACTGGTGCAAATGAGGTGTCCTCTCGATCCCATGCTATACTTCAGCTTTGTATCAAGAGATCAGCTGATGGGACTGAATCAAAGCCTGCTCGAGTTGTAGGCAAGCTATCTTTCATAGATCTTGCAGGAAGTGAGCGTGGTGCTGATACTACAGATAATGATAAGCAGACAAGAGGAAGTAAATTGACTGAAGTTCTTAGAGACTCTTTTGTTGGTGATTCACGCACTGTAATGATATCTTGCATCTCCCCAGGCTCAGGTTCATTCGAGCATACTCTTAACACATTAAGATATGCCGACAGGGTCAAGAGTTTATCAAAAGGGAACAGCTCTAGAAGGGATCCACTTTCTTCATCTTCCAACCTTAGAGACTCAACTGCATTGCCTTCATCTTCAGTTTTATCACATGAAGCTACTTTTGACAAAGAAATAAATTATGTTTCCAGTGAGAAGAACCGATTTGGTTGGTCCAAACAACTTGAAAGAGAACCTTATCCTCCAGTGGATGTGGGTTGTGTTCCAAGTGGTAGGATGGGGGGAAATGTAGCGGCATCATTGTCAGACCCTCTAAAAGGTCAAATAGGAGGTCAAAATGACAAAGCTGATAGTAAAACTGGTTACCGTGGACGAACTTATGATTATGAACAAGCCAGAGCACGAAAGACTAGTAAGAAGGTAGAGTCCAGCGAATTATCAGCTGTAGAAGACCAGAGGAAGATAGACTCTCATGTGAAATGTGTGCAACTGCCACATTTTTTGGCTGATTGTTCTAATCCTGATGATGATTTAAACGTCCTGCTGAAGGAAGAGGAAGATCTCGTAACTGGTCACAGGAGACAAGTGAAGGAGACCATAGACATTGTTAGGGAGGAGATGAATCTACTTGTTGAAGCTAATCAACCAGGAATTCAGCTGGGCGATTATATTTCTAAATTAAATGTCATTTTGTCAAAGAAGGCTGCAGGAATTCGTCAATTGCAGACGCAGCTGGCTCAATTTCAGAGACGTTTGAATGAGTATAATGTTTTGTTATCTTCTGGTAAATGA 1866 0.4116 MGVIGRQMPRSNSAVHNQPQNSDNFLEATSHGRWSSTLTQEFGSLSSLSWNDDDQVLPTGLTHGLFDLRSFDTELLPEMSSIHDEYLIDQAVCGQGFDDSEPFLSTNKLVNSSHGLPDKNVLGSFSADKDRTNNVAKIKVVVRKRPINKKELAKKEEDIITIDSNSLTVHERKLKVDLTEYIEKHEFVFDAVLSEDVSNDEWKDLYYATTASQSIQRYFKINAPYIPEPRKLSMREDGKQQVCIVGLQEYRVSNVKKIKEFIERGDATRSTGTTGANEVSSRSHAILQLCIKRSADGTESKPARVVGKLSFIDLAGSERGADTTDNDKQTRGSKLTEVLRDSFVGDSRTVMISCISPGSGSFEHTLNTLRYADRVKSLSKGNSSRRDPLSSSSNLRDSTALPSSSVLSHEATFDKEINYVSSEKNRFGWSKQLEREPYPPVDVGCVPSGRMGGNVAASLSDPLKGQIGGQNDKADSKTGYRGRTYDYEQARARKTSKKVESSELSAVEDQRKIDSHVKCVQLPHFLADCSNPDDDLNVLLKEEEDLVTGHRRQVKETIDIVREEMNLLVEANQPGIQLGDYISKLNVILSKKAAGIRQLQTQLAQFQRRLNEYNVLLSSGK 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1080 621 MobiDBLite consensus disorder prediction 378 406 - -
Bisa03g1080 621 MobiDBLite consensus disorder prediction 10 27 - -
Bisa03g1080 621 ProSiteProfiles Kinesin motor domain profile. 227 324 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bisa03g1080 621 PANTHER KINESIN-RELATED PROTEIN 6 331 616 IPR027640 GO:0003777|GO:0007018
Bisa03g1080 621 PRINTS Kinesin heavy chain signature 308 326 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bisa03g1080 621 PRINTS Kinesin heavy chain signature 274 291 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bisa03g1080 621 MobiDBLite consensus disorder prediction 1 27 - -
Bisa03g1080 621 Coils Coil 596 616 - -
Bisa03g1080 621 ProSiteProfiles Kinesin motor domain profile. 137 201 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bisa03g1080 621 Gene3D Kinesin motor domain 223 393 IPR036961 -
Bisa03g1080 621 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 134 378 IPR027417 -
Bisa03g1080 621 ProSiteProfiles Kinesin motor domain profile. 331 378 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bisa03g1080 621 SMART kinesin_4 135 384 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bisa03g1080 621 ProSitePatterns Kinesin motor domain signature. 307 318 IPR019821 GO:0003777|GO:0005524|GO:0007018
Bisa03g1080 621 MobiDBLite consensus disorder prediction 382 406 - -
Bisa03g1080 621 Pfam Kinesin motor domain 230 329 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bisa03g1080 621 Pfam Kinesin motor domain 331 377 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bisa03g1080 621 Gene3D Kinesin motor domain 119 222 IPR036961 -
Bisa03g1080 621 MobiDBLite consensus disorder prediction 461 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1080 Bisa-ChrBisa03 14556895 14560716 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1080 231 378 Calmodulin-binding Proteins AT5G65930 32.768 5.09e-17 83.6