Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1078 ATGGAGCAGAACAACGTCATCGCTCCCTTCGTTATAAAGACATATCACATGGTCAACGATCCCGGTGCCGATTGTCTCATCACTTGGGGACCAGCCAATAACAGCTTCATCGTCGTCAACCCTTTGGATTTCTCGCAGAGGATGTTACCTGCGTATTTCAAGCACAACAACTTCTCCAGCTTCGTTCGTCAGCTCAATACCTACGTGAGCATCATCAATTCCAATACTCTTTTCCTTTCTTTCTTCTTTCTTGGGTTCAGAAAGATGGATCCGGATAGATGGGAGTTTGCGAACGAGTGGTTCCTTCGGGGCCAGAAGCACTTGCTGGTGAATATAGTGAGGAAGAGGCAAAGTAAGAGTAATGGGGTGTCCTTGCAGGCAGGAGGGAAGGTGGAGGAATTGGAGGAAGAAATGATGGTGATGGAAATAGCGAGGTTGAAGGAGGAGCAGAAGGTGCTGGAGAAGGAGGTGGAAGGGATGAACAAGAGGCTGGAGGCTACGGAGAGACGACCTCACCAAATGATGGCTTTTCTACGCAAAGTTGTGGACGACCCAGAGGTTCTTACCCGCATATTAATGGAAAGAGAACGAAGGGTCTTGAGGGACAAGAAGCGACGCTTCATATCCGCCGCCACCTCCTCCTCATCTTCCTCCTCTGGCATGTTCCTCAAATCAGAGCTGGACGAGGGCGAACCCACGGTGGCAGGTATCATGACCTCCTCGCCGGAGACTGGTTCTGATCAGTCATCGCCGCCAGATTGGTGGGTCCAAAGGCCAGCAATAATGGATGACCCTCGGAATATTGATCAACAGTGTAATAGTGGCGCCACCGTTCCGACGCCGTTGACTGCTGTGTGGCCGCCTCTGGGAGGCAGCTTCTCGGACTGCGACAACAGTGAGGTGCAAATGAGGTACTTCACGGAAATGGCGGCGGAGAGCCGGCCGCCCCCGCCTCCTTATCCATTCTCGTTGTTGGAGGGTGGCTTTTAG 990 0.5222 MEQNNVIAPFVIKTYHMVNDPGADCLITWGPANNSFIVVNPLDFSQRMLPAYFKHNNFSSFVRQLNTYVSIINSNTLFLSFFFLGFRKMDPDRWEFANEWFLRGQKHLLVNIVRKRQSKSNGVSLQAGGKVEELEEEMMVMEIARLKEEQKVLEKEVEGMNKRLEATERRPHQMMAFLRKVVDDPEVLTRILMERERRVLRDKKRRFISAATSSSSSSSGMFLKSELDEGEPTVAGIMTSSPETGSDQSSPPDWWVQRPAIMDDPRNIDQQCNSGATVPTPLTAVWPPLGGSFSDCDNSEVQMRYFTEMAAESRPPPPPYPFSLLEGGF 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1078 329 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 7 229 IPR027725 -
Bisa03g1078 329 SMART hsfneu3 6 115 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa03g1078 329 Pfam HSF-type DNA-binding 10 115 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa03g1078 329 Gene3D - 2 116 IPR036388 -
Bisa03g1078 329 MobiDBLite consensus disorder prediction 310 329 - -
Bisa03g1078 329 Coils Coil 131 170 - -
Bisa03g1078 329 PRINTS Heat shock factor (HSF) domain signature 48 60 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa03g1078 329 PRINTS Heat shock factor (HSF) domain signature 61 73 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa03g1078 329 PRINTS Heat shock factor (HSF) domain signature 10 33 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa03g1078 329 FunFam Heat stress transcription factor B-4 2 116 - -
Bisa03g1078 329 SUPERFAMILY "Winged helix" DNA-binding domain 7 115 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1078 Bisa-ChrBisa03 14543632 14544692 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1078 6 215 HSF AT3G24520 58.879 1.73e-81 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Bisa03g1078 HSF_DNA-bind 8.5e-27 CL0123