Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1071 ATGTCAACCTCGCCATCTCCCGGAGGTTCTCCGGCTCCCACATCGCCGCCGCCGACTAACACTACTTCTCCTCCGCCCGCCACTAACACAACCTATCCTCCGCCGCAGAGCCCCCCTGCTACTCCCTCTGCACCACCGCCGGCCACTCCTACCCCTCCGCAGCCGTCTCCCAGCCCTCCGTCTCCCTCACCACCGTCACCTTCCACGCCGTCAACTTCCTCGCCGCCGCCTCCGTCTAGTACTAACACTCCACCGAGTCCAGTGACTCATAACTCGCCGCCTCCTCCTCCTTCGCCTCCGAATAGGAGCCCGCCGCCACCTGCTTCAAAAACGCCGTCTCCTCCTTCGTCGACCACGGTATCAACTGGTGTTATTGTGGGAATCGCCATTGGTGCTGCGGCGGTTCTTCTAGTGTTGTGCGTTTTGTGCATATGTTGCAGGAGGGATAAGAGGAGAAGACGTAGTGAGGGGTACTATGTGCCGCCACCTCCGCCACGTGGACCTAAAGATGATCAATATGGTGGCCCACCACGTCAGTGGCAACATAATGCTCCCCCTCCTTCAGATCATGTTGTCACGGTGGTGCCAAAGCCGACACCGCCACCTCCAGTTGCATCTCGACCACCCCAATCACCTGCTTATGTTCCTCAACCTCCTCCACCACCCCCACCACCTTTCCTGAGCAGCAGTGGGGGGTCTGGTTCCAACTATTCAGGTGGTGAAAATCCACTTCCACCTCCTTCAGGAATAGCATTGGGTTTCTCAAAGAGCACATTCTCGTACGAGGAGTTGGCTCAGGCAACAGATGGATTCTCTGATGCCAATCTCCTAGGACAAGGTGGATTTGGATATGTGCACAAAGGAATTCTTCCAAATGGGAAGGAGGTGGCCATCAAGCAGCTAAAGGCTGGTAGTGGACAGGGGGAGCGTGAATTTCAAGCAGAAGTTGAGATCATTAGTAGAGTTCATCACAGACATCTTGTTTCTTTGGTTGGATACTGCATTAGTGGAATTCAGAGGCTGCTTGTTTATGAATTTGTTCCTAACAATACAATGGAGTTCCACTTACATGGAAAAGGGCGACCTACTATGGATTGGCCGACAAGACTGAAACTTGCAATAGGATCTGCAAAAGGACTGGCGTATCTCCATGAGGATTGTCATCCTAAGATAATCCATCGTGATATCAAAGCTGCTAATATACTTCTGGATTTTAAGTTTGAAGCAAAGGTTGCAGATTTTGGACTTGCAAAGATTTCTTCTGATGTCAATACTCACGTCTCCACTCGAGTAATGGGAACTTTTGGGTATCTGGCTCCAGAATATGCTTCAAGTGGGAAACTCACTGACAAATCAGATGTTTTCTCCTTTGGGGTCATGCTCCTGGAGCTAATTACTGGACGTCGACCAGTCGACTCAAGTCATACTTTCATGGACAGTTTGGTAGACTGGGCAAGGCCTTTGCTTACACGTGCATTGGAAGATCAAGATTTTGATTCTCTGGTTGATCCAAGGCTGAAAAATGAATATGACCCCCATGAAATGGCTTGCATGGTTGCATGTGCTGCAGCTTGCACACGTCATTCAGCACGACATAGACCAAAAGTGAGCCAGGTTGTTCGTGCTCTAGAAGGGGAAGTGTCTCTGTCAGATCTTAACGAAGGAATCAAACGTGGACACAGCACTATGTACAGTTCTCGTGGAAGCTCAGATTATGACACTGCGCAGTACAAGGAAGACATGAAAAAGTTCAGGAAAATGGCGTTGGGAACGCAAGAGTTTGGAGGGAGCAGTGAGTACAGTGCATCAGGCTCAAGCAGTGAAGCCCACAGCCGCCACACCACCCGGGAAATAGAAATGAGGAAGACGAGTAACGTTTTCACCCATTTCCATGTGATGGGACCTGTGAAGTCTATGGCACAAATAGAAGTTACACTTTTGGCAAAAAGAGTATCCTGA 1959 0.5028 MSTSPSPGGSPAPTSPPPTNTTSPPPATNTTYPPPQSPPATPSAPPPATPTPPQPSPSPPSPSPPSPSTPSTSSPPPPSSTNTPPSPVTHNSPPPPPSPPNRSPPPPASKTPSPPSSTTVSTGVIVGIAIGAAAVLLVLCVLCICCRRDKRRRRSEGYYVPPPPPRGPKDDQYGGPPRQWQHNAPPPSDHVVTVVPKPTPPPPVASRPPQSPAYVPQPPPPPPPPFLSSSGGSGSNYSGGENPLPPPSGIALGFSKSTFSYEELAQATDGFSDANLLGQGGFGYVHKGILPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHRHLVSLVGYCISGIQRLLVYEFVPNNTMEFHLHGKGRPTMDWPTRLKLAIGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKISSDVNTHVSTRVMGTFGYLAPEYASSGKLTDKSDVFSFGVMLLELITGRRPVDSSHTFMDSLVDWARPLLTRALEDQDFDSLVDPRLKNEYDPHEMACMVACAAACTRHSARHRPKVSQVVRALEGEVSLSDLNEGIKRGHSTMYSSRGSSDYDTAQYKEDMKKFRKMALGTQEFGGSSEYSASGSSSEAHSRHTTREIEMRKTSNVFTHFHVMGPVKSMAQIEVTLLAKRVS 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1071 652 MobiDBLite consensus disorder prediction 595 618 - -
Bisa03g1071 652 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 131 603 IPR047117 -
Bisa03g1071 652 MobiDBLite consensus disorder prediction 155 249 - -
Bisa03g1071 652 ProSiteProfiles Protein kinase domain profile. 271 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g1071 652 Pfam Protein tyrosine and serine/threonine kinase 276 543 IPR001245 GO:0004672|GO:0006468
Bisa03g1071 652 ProSitePatterns Serine/Threonine protein kinases active-site signature. 391 403 IPR008271 GO:0004672|GO:0006468
Bisa03g1071 652 MobiDBLite consensus disorder prediction 9 113 - -
Bisa03g1071 652 FunFam Proline-rich receptor-like protein kinase PERK1 347 554 - -
Bisa03g1071 652 Gene3D Transferase(Phosphotransferase) domain 1 347 557 - -
Bisa03g1071 652 SUPERFAMILY Protein kinase-like (PK-like) 247 543 IPR011009 -
Bisa03g1071 652 Gene3D Phosphorylase Kinase; domain 1 250 346 - -
Bisa03g1071 652 MobiDBLite consensus disorder prediction 595 609 - -
Bisa03g1071 652 ProSitePatterns Protein kinases ATP-binding region signature. 277 299 IPR017441 GO:0005524
Bisa03g1071 652 MobiDBLite consensus disorder prediction 191 228 - -
Bisa03g1071 652 FunFam proline-rich receptor-like protein kinase PERK1 249 346 - -
Bisa03g1071 652 PRINTS Proline rich extensin signature 43 55 - -
Bisa03g1071 652 PRINTS Proline rich extensin signature 55 76 - -
Bisa03g1071 652 PRINTS Proline rich extensin signature 19 35 - -
Bisa03g1071 652 PRINTS Proline rich extensin signature 3 15 - -
Bisa03g1071 652 MobiDBLite consensus disorder prediction 1 120 - -
Bisa03g1071 652 SMART serkin_6 271 543 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1071 Bisa-ChrBisa03 14447686 14452001 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1071 96 619 Trihelix Transcription Factor Family AT1G70460 49.907 2.93e-164 486
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Bisa03g1071 PK_Tyr_Ser-Thr 4.3e-45 CL0016