Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1068 ATGGCAAACTATTCTGCAAATGGTAACTCTCATCCTGCGCCCGCCCCTAGCACAACCTATCCTTTGCCGCAGAGCCCCCCTGCTCCTCCCCCACCACTATCACCTTCCATGCCGTCTCCTCCTTCGTCGTCAACTGTATCAACTGGTGCTATTGTGGGAATCGTCATTGGTGTTGCGGCGGTTCTTCTAGTGTTGGGCGTTTTGTGCATATATTGTAGGAGGAATAAGAGGAGAAGACGTAGTGAGGGGTACTATGTGCCGCCAACGCCGCCACGTGGACCTAAAGATGATCAATATGGTGGCCTGCCACGTCAGTGGCAACATAACGCTTCCCCTTCTTCAGATCATATTGTCACGGTGGTGCCAAAGAGCACATTCTCGTACGAGGAGTTGGCTCGGGCAACAGATGGATTCTCTGATGCCAATCTCCTAGGACAAGGTGGATTTGGATATGTGCACAAAGGAATTCTTCCAAATGGGAAGGAGGTGGCCATCAAGCAGCTAAAGGCTGGTAGTGGACAGGGGGAGCGTGAATTTCAAGCAGAAGTTGAGATCATTAGTAGGGTTCATCACAGACATCTTGTTTCTTTGGCTCTGATAGATATATGTACTGCAGGAAAAGGGCGATCTACTATGGATTGGCCGACAAGGCTGAAACTTGCAATAGGATCTGCAAAAGGACTGGCGTATCTTCATGAGGATTGTCATCCTAAGATAATCCATCGTGATATCAAAGCTGCTAACATACTTCTGGATTTAAAGTTTGAAGCAAAGCTAATTACAGGACGTCGACCAGTCGACTCAAGTCATACTTTCATGGAGGATTGCTTGGTAGACTGGGCAAGGCCTTTACTTACGCGTGCTTTGGAAGATCAAGATTTTGATTCTCTGGTTGATCCACGGCTGAAAAATGAATATGACCCCCATGAAATGGCCTGCATGGTTGCATGTGCTGCAGCTTGCACACGTCATTCAGCACGACATAGACCAAAAGTGAGCCAGGTTGTTCGTGCTCTGGAAGGGGAAGTGTCTGTGTCAGATCTTATCGAAGGAACCAAACGTGGACACAGGACTATTTACAGTTCTCGTGGAAGCTCAGATTATGACACTGCGCAGTACAAGGAAGACATGAAAAAGTTCAGGAAAATGGCGTTGGGAACGCAAGAGTTTGGAGGGAGCAGTGAGTACAGTGCATCAGGCTCAAGCAGTGAAGCCCACAGCCGCCACACCACCCGGGAAATAGAATTGAGGAAGACGAGTAATGGTCAAGATTTACCATATTTATAA 1287 0.4786 MANYSANGNSHPAPAPSTTYPLPQSPPAPPPPLSPSMPSPPSSSTVSTGAIVGIVIGVAAVLLVLGVLCIYCRRNKRRRRSEGYYVPPTPPRGPKDDQYGGLPRQWQHNASPSSDHIVTVVPKSTFSYEELARATDGFSDANLLGQGGFGYVHKGILPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHRHLVSLALIDICTAGKGRSTMDWPTRLKLAIGSAKGLAYLHEDCHPKIIHRDIKAANILLDLKFEAKLITGRRPVDSSHTFMEDCLVDWARPLLTRALEDQDFDSLVDPRLKNEYDPHEMACMVACAAACTRHSARHRPKVSQVVRALEGEVSVSDLIEGTKRGHRTIYSSRGSSDYDTAQYKEDMKKFRKMALGTQEFGGSSEYSASGSSSEAHSRHTTREIELRKTSNGQDLPYL 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1068 428 MobiDBLite consensus disorder prediction 1 15 - -
Bisa03g1068 428 SUPERFAMILY Protein kinase-like (PK-like) 112 339 IPR011009 -
Bisa03g1068 428 MobiDBLite consensus disorder prediction 82 113 - -
Bisa03g1068 428 MobiDBLite consensus disorder prediction 391 428 - -
Bisa03g1068 428 Gene3D Phosphorylase Kinase; domain 1 109 205 - -
Bisa03g1068 428 Pfam Protein kinase domain 140 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g1068 428 MobiDBLite consensus disorder prediction 16 39 - -
Bisa03g1068 428 ProSiteProfiles Protein kinase domain profile. 138 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g1068 428 Gene3D Transferase(Phosphotransferase) domain 1 259 353 - -
Bisa03g1068 428 Gene3D Transferase(Phosphotransferase) domain 1 206 258 - -
Bisa03g1068 428 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 113 212 - -
Bisa03g1068 428 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 206 259 IPR047117 -
Bisa03g1068 428 MobiDBLite consensus disorder prediction 1 44 - -
Bisa03g1068 428 SMART serkin_6 138 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g1068 428 ProSitePatterns Protein kinases ATP-binding region signature. 144 166 IPR017441 GO:0005524
Bisa03g1068 428 MobiDBLite consensus disorder prediction 391 405 - -
Bisa03g1068 428 ProSitePatterns Serine/Threonine protein kinases active-site signature. 239 251 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1068 Bisa-ChrBisa03 14369909 14374213 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1068 9 415 Trihelix Transcription Factor Family AT1G70460 39.155 5.79e-96 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Bisa03g1068 Pkinase 2.2e-11 CL0016