Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1049 ATGTCTGTGCCACTAGAGCAGGACTATGTAGGCTTGGCAGAGCTTCCTTCAATGGAGAAAAGCTCAGACAAGTTTTCTCAGAGGAGCAGTAGTGGCTTGAACCTGAAGGCCACTGAGCTACGCCTTGGCTTACCCGGGTCCGAGTCGCCGGAGAGGGATGGTGGTGGCGCTGCCAAGAGTGTAGTGGTCTGTGGAGCCAAGAGGGGTTTCTCCGACACCATGAACGGTGGTCGTGGAAAGTGGGTTATGTCGGAGAATGGCGGATCTGAGGTGGCTTTGGGTGCCTCCCTTGTCAAAGACACTAACCATCACTCGCCTAAGCCATTGGTGCATGACAAGAAGCCCCAGATTTCAGCTCTCCCTGCAAAGGCACAAGTGGTGGGATGGCCACCAATCCGTTCTTTCAGGAAGAACTCCATGGCTTCTAATTCTCAAAAGAATGAGGATGGTGCAGAGGCCAAATCTGGATGTCTTTATGTAAAAGTGAGAATGGATGGTGCCCCCTACTTGAGGAAAGTGGATCTCAAACACTTGGGTAGTTACCAGCAGCTTTCCTCAGCCCTTGAAAAGATGTTTAGTTGTTTTACAATCGGTCAATGTGGATCTCACGGAGCTTCAAGTCATGATAATTTGAGTGAAAGTAAGCTGATGGATCTCCTTCATGGTTCGGAATATGTGCTCACCTATGAAGACAAGGATGGCGATTGGATGCTAGTTGGTGATGTACCCTGGGAGATGTTCACTGACTCTTGCAAGAGATTGAGGATAATGAAGAGTTCTGAGGCAATTGGGCTAGCACCAAGAGCAATGGAGAAGTGCAAAAACCGCAACTAG 834 0.4928 MSVPLEQDYVGLAELPSMEKSSDKFSQRSSSGLNLKATELRLGLPGSESPERDGGGAAKSVVVCGAKRGFSDTMNGGRGKWVMSENGGSEVALGASLVKDTNHHSPKPLVHDKKPQISALPAKAQVVGWPPIRSFRKNSMASNSQKNEDGAEAKSGCLYVKVRMDGAPYLRKVDLKHLGSYQQLSSALEKMFSCFTIGQCGSHGASSHDNLSESKLMDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTDSCKRLRIMKSSEAIGLAPRAMEKCKNRN 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1049 277 Gene3D - 151 271 - -
Bisa03g1049 277 ProSiteProfiles PB1 domain profile. 157 259 IPR000270 GO:0005515
Bisa03g1049 277 FunFam Auxin-responsive protein 152 269 - -
Bisa03g1049 277 Pfam AUX/IAA family 38 268 IPR033389 -
Bisa03g1049 277 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 33 264 IPR003311 GO:0005634|GO:0006355
Bisa03g1049 277 MobiDBLite consensus disorder prediction 20 36 - -
Bisa03g1049 277 MobiDBLite consensus disorder prediction 17 57 - -
Bisa03g1049 277 SUPERFAMILY CAD & PB1 domains 155 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1049 Bisa-ChrBisa03 14073116 14075270 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1049 100 262 B3 DNA Binding Superfamily AT3G61830 30.061 1.98e-10 59.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Bisa03g1049 AUX_IAA 1e-86 CL0072