Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1042 ATGGAAAGAATAGTCGGCGACAAGTATAAGCTTGGCCGCAAGATCGGAAGTGGATCCTTCGGTGAAATCTACCTTGCTACGCATATTGATACCGTCGAGATCGTCGCCATTAAGATCGAGAATAGTAAGACAAAGCATCCGCAATTGCTCTATGAGGCAAAACTGTACAATATTCTTCAAGGAGGAAGTGGCATTCCTAGCATAAAATGGTCTGGCGTGGATGGAGAGGAGAACGTGCTTGTTCTTGATTTGCTGGGACCGAGTCTTGAGGACCTGTTTGTGTATTGTGGAAGAAAGTTTTCACTGAAGACAGTATTAATGTTGGCTGATCAAATGATCACTCGAATAGAATATGTGCATTCTAAGGGATTTTTACATAGGGATATAAAACCTGATAACTTTCTCATGGGACTTGGTCGAAAGGCTAACCAGGTTTACATAATTGATTTTGGCCTTGCAAAAAGGTACCGGGACTCCACAACCAATCGCCACATCCCTTACAGGGAGAACAAAAACTTAACAGGAACTGCACGTTATGCAAGTTGCAATACTCATCTTGGGATTGAGCAAAGCCGAAGGGATGACCTGGAGTCACTGGGATATGTTCTTCTGTACTTCCTGAGAGGGAGCCTTCCTTGGCAGGGTCTAAAGGCTGCAACGAAGAAGCAAAAGTATGATAAAATATGTGAGAAGAAATTATCAACTCCTATTGAGGTCCTCTGCAAATCTCATCCTGTGGAGTTTGCTTCATACTTTCACTATTGCCACTCTCTGACATTTGATCAGCGACCTGATTATGGATTCTTGAAGCGTGTACTTCGGGAACTATTTGCACGAGAAGGTTATGACTCTGATTATGTATTTGATTGGACCATCTTGAAGTATCAACAAGCACAAAAGAACAAAGCTCAGCCTCGAATATCTCAGGTTACTGGAGCGAGCAACACTCGTGCAGTGCCAATGGATGTTGACAACCATCATGGTGTTAATGCTTATTCAGAGGATGTATCAGGTCACATTAGGTCAGGTAATGCTACTGGTTCTGGTGTTAAATTGCAGTTTAAATCACCAGTGGACAAAAATATAGGTTCTGATCATCCTCTTAACACGAATATTTTTGGAGAGCAAAATATGCCCTCTACTTCATATCTGCTTTCTGGTACCTCCAAGAGGAACTCCTTGAAGCCTTAG 1191 0.424 MERIVGDKYKLGRKIGSGSFGEIYLATHIDTVEIVAIKIENSKTKHPQLLYEAKLYNILQGGSGIPSIKWSGVDGEENVLVLDLLGPSLEDLFVYCGRKFSLKTVLMLADQMITRIEYVHSKGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKRYRDSTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKLSTPIEVLCKSHPVEFASYFHYCHSLTFDQRPDYGFLKRVLRELFAREGYDSDYVFDWTILKYQQAQKNKAQPRISQVTGASNTRAVPMDVDNHHGVNAYSEDVSGHIRSGNATGSGVKLQFKSPVDKNIGSDHPLNTNIFGEQNMPSTSYLLSGTSKRNSLKP 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1042 396 ProSiteProfiles Protein kinase domain profile. 9 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g1042 396 CDD STKc_CK1_delta_epsilon 8 282 - -
Bisa03g1042 396 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Bisa03g1042 396 PANTHER CASEIN KINASE-RELATED 7 317 - -
Bisa03g1042 396 SUPERFAMILY Protein kinase-like (PK-like) 4 290 IPR011009 -
Bisa03g1042 396 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Bisa03g1042 396 Pfam Protein kinase domain 9 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g1042 396 SMART serkin_6 9 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g1042 396 Gene3D Transferase(Phosphotransferase) domain 1 1 332 - -
Bisa03g1042 396 FunFam Casein kinase I isoform delta-like 1 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1042 Bisa-ChrBisa03 14023379 14026943 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1042 9 215 EF-hand Containing Proteins AT4G23650 29.577 8.69e-15 73.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Bisa03g1042 Pkinase 2.1e-28 CL0016