Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1036 ATGAATCAACTGGGCCTTCTTCTTCGCCTTTCTCTTCTCTTTCTCATATTCCTTCATGTCAGAGCACAGACACCACAGAATTCACCTTCGGTCGATAACATCTCCAATTTCCAACCAAGCCTAGCAATTGTCATAGGAATCCTGTGTCTCATGTTTTCACTGACCTTCATTCTTCTCATGTATGCAAAATTCTGTCAACGCAGAGCCTCAGCTCCCGTTGACCCGGAAAACAACCATCCACTTCTTAGATCAAGGTCGAGATTCTCAGGAATCGACAAGTCTGTCATAGAATCACTCCCCTTCTTCAGATTCTCTTCCCTCAGAGGCTCAAAGGAAGGTCTTGAATGTGCAGTGTGCTTATCAAAGTTTGAAGATATTGAAATCCTCAGACTGCTTCCTAAATGCAAACATGCCTTTCATATCGACTGCATAGACCATTGGCTCGAGAAACACTCGAGTTGTCCTATTTGTAGACGCAAGGTCAATCCTGAGGACCAGACGATGTTCACATATTCAAATAGTTTTAGGCTTCTAGCTAATCAGTCAGAGCTAGGTGAGGAACCCAATATAGAGATCTTTGTGCAGAGAGAAGAAGAACATCATGGGTCGTCCAGATTCAGTATTGGAAGCAGCTTTAGGAAATCTGGAAAGGGTATTAAGGAAGAAGAATTGCCAATCCGAGAAGAAGGTGGCGAAAGAAAGTTCTATCACAAGCATAACCACAAAATTACTGTATCTGATGTGGTGTTCAAGCATCGATGGAGCAACGTGACCTCTTCAGACCTCATGTTCTTGAACTCAGAGATGCTCACTGCTATGCAAAGCAAAAGATTCAATCTTCTGGAATCAGATAATGGAGACCAGATTCCAGCTTCAAGATTAGTTACAGAAGATGACCATATTGTCAACATAAAGGAGGAGATGGAGAGGAAGATTTCGTTTGAGACAAAAGTCGGTGCATTAAGTAAAATTAACTCAGTGTTGGATATATCAGAATCAGATTGTGCAGGAACTTCTTCAAGTCATACATCGAAATATGTGAATCCGGGTGAGAAAAGATCGATATCAGAAATCACTGCTGTGTCTAGATGTGGAGATTTGGGCACGAGAAACAGGGTGTTGAAGGATTCTTCTGTGCATGGAAATAATGTCAGAGAGGAAAGAATGAGGCAGATATGGTTGCCAATCGCCAGAAGAACAGTTCAATGGTTGGTGAATAGAGAAACAACATCTCAGCAATCTCAGAATAAACAACAGCCATGGAATGTATAG 1272 0.4182 MNQLGLLLRLSLLFLIFLHVRAQTPQNSPSVDNISNFQPSLAIVIGILCLMFSLTFILLMYAKFCQRRASAPVDPENNHPLLRSRSRFSGIDKSVIESLPFFRFSSLRGSKEGLECAVCLSKFEDIEILRLLPKCKHAFHIDCIDHWLEKHSSCPICRRKVNPEDQTMFTYSNSFRLLANQSELGEEPNIEIFVQREEEHHGSSRFSIGSSFRKSGKGIKEEELPIREEGGERKFYHKHNHKITVSDVVFKHRWSNVTSSDLMFLNSEMLTAMQSKRFNLLESDNGDQIPASRLVTEDDHIVNIKEEMERKISFETKVGALSKINSVLDISESDCAGTSSSHTSKYVNPGEKRSISEITAVSRCGDLGTRNRVLKDSSVHGNNVREERMRQIWLPIARRTVQWLVNRETTSQQSQNKQQPWNV 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1036 423 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 90 167 IPR013083 -
Bisa03g1036 423 SUPERFAMILY RING/U-box 95 164 - -
Bisa03g1036 423 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 24 408 - -
Bisa03g1036 423 FunFam RING-H2 finger protein ATL43 91 165 - -
Bisa03g1036 423 ProSiteProfiles Zinc finger RING-type profile. 116 158 IPR001841 -
Bisa03g1036 423 SMART ring_2 116 157 IPR001841 -
Bisa03g1036 423 Pfam Ring finger domain 115 158 IPR001841 -
Bisa03g1036 423 CDD RING-H2_EL5-like 115 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1036 Bisa-ChrBisa03 13974933 13976204 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1036 7 419 C3H Transcription Factor Family AT4G28890 46.532 1.06e-111 333