Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1027 ATGGCAGATTATCTGGCAATGATGCAAGAACTGCAAGTGGAAAAGGAAAAAGAACGCGACATAATGCGCCAAATAGTTGAGATACTGAGCCACTTGCAATCTCCAAATGCTCTGTCATGCTCATACCATACCAAGGTATCTACGAAAACCTTGAGCCAGGCCGATATGACATACAGGCTTTTAATACCCAAAAACGACGCCAAATCCAATATCTTGCCCTACTTGACCGCCCAAGAAGACGTCAAGATTGGAGTCCCAGTGATGGTGTATGGCAAAGATGGATCCGGGTACCTCATGACCTTCAAGTTTTGGAGTGTATGCTACGTGCTCTGTGCAAACTGGTCATTGTTCATCAAAGATCAGGGCTTGCAGCTCCACGATGAAGTCGCCCTCTGGCTCTTCTCCTCACGCCATCCCACACGCCACCATGATGCTGCCTTCTGCTGTGGTTCGTCTTCTCTGCTTCCCTTTCATTGCTTCGTCTTCTCTGTTGCTACCTGCGAGGAGGAAGTCATCCGAATAGACGCCGCCAACTCACTGTCAAAACCTACAACCTTCTTTCTGTGGTCTGCAACATATCAGGAGATTCAAGACTAA 597 0.4774 MADYLAMMQELQVEKEKERDIMRQIVEILSHLQSPNALSCSYHTKVSTKTLSQADMTYRLLIPKNDAKSNILPYLTAQEDVKIGVPVMVYGKDGSGYLMTFKFWSVCYVLCANWSLFIKDQGLQLHDEVALWLFSSRHPTRHHDAAFCCGSSSLLPFHCFVFSVATCEEEVIRIDAANSLSKPTTFFLWSATYQEIQD 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1027 198 PANTHER OS05G0237600 PROTEIN 40 148 - -
Bisa03g1027 198 CDD B3_DNA 48 134 IPR003340 GO:0003677
Bisa03g1027 198 Gene3D - 39 147 IPR015300 -
Bisa03g1027 198 SUPERFAMILY DNA-binding pseudobarrel domain 47 140 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1027 Bisa-ChrBisa03 13873890 13877284 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1027 60 138 B3 DNA Binding Superfamily AT4G03170 37.805 1.54e-10 57.0